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SCNpilot_expt_500_p_scaffold_3622

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3622_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..352)
DNA (351bp) protein (117aa)
IstB-like ATP-binding protein n=3 Tax=Azotobacter vinelandii RepID=C1DL64_AZOVD
Uncharacterized protein {ECO:0000313|EMBL:AIL13685.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
transposase/IS protein
SCNpilot_expt_500_p_scaffold_3622_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(349..903)
DNA (555bp) protein (185aa)
ISPsy4, transposase n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2FYK2_BURVI
Transposase {ECO:0000313|EMBL:AIL13870.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
tnpA; transposase (DDE site) ISRme20
SCNpilot_expt_500_p_scaffold_3622_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(926..1246)
DNA (321bp) protein (107aa)
Helix-turn-helix, Fis-type n=3 Tax=Azotobacter vinelandii RepID=C1DL63_AZOVD
Transposase {ECO:0000313|EMBL:AIL13870.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
transposase, helix-turn-helix, Fis-type
SCNpilot_expt_500_p_scaffold_3622_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1539..2087
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BB2E
Uncharacterized protein {ECO:0000313|EMBL:AIL13938.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
proQ; solute/DNA competence effector; K03607 ProP effector
SCNpilot_expt_500_p_scaffold_3622_5
Wuchereria bancrofti, Wuchereria, Spirurida, Chromadorea, Nematoda, Metazoa

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comp(2093..2398)
DNA (306bp) protein (102aa)
XRE family Transcriptional regulator n=1 Tax=Wuchereria bancrofti RepID=J9B498_WUCBA
XRE family Transcriptional regulator {ECO:0000313|EMBL:EJW81825.1}; TaxID=6293 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Spirurida; Filarioidea; Onchocercidae; Wuchereria.;" source="Wuchereria bancrofti.;"
XRE family transcriptional regulator
SCNpilot_expt_500_p_scaffold_3622_6
Wuchereria bancrofti, Wuchereria, Spirurida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(2420..2698)
DNA (279bp) protein (93aa)
Plasmid maintenance system killer n=1 Tax=Wuchereria bancrofti RepID=J9EH72_WUCBA
Plasmid maintenance system killer {ECO:0000313|EMBL:EJW81826.1}; TaxID=6293 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Spirurida; Filarioidea; Onchocercidae; Wuchereria.;" source="Wuchereria bancrofti.;"
proteic killer suppression protein
SCNpilot_expt_500_p_scaffold_3622_7
Tatlockia micdadei, Tatlockia, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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2927..3412
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Paenisporosarcina sp. HGH0030 RepID=S2XGP2_9BACL
Acyl-CoA N-acyltransferase {ECO:0000313|EMBL:CEG60216.1}; TaxID=451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Tatlockia.;" source="Tatlockia micdadei (Legionella micdadei).;"
SCNpilot_expt_500_p_scaffold_3622_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3384..3830
DNA (447bp) protein (149aa)
transposase n=1 Tax=Rickettsia helvetica RepID=UPI00028A287F
Transposase {ECO:0000313|EMBL:AIL13840.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
transposase for insertion sequence element
SCNpilot_expt_500_p_scaffold_3622_9
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3855..4334
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI000366D8DB
Transposase {ECO:0000313|EMBL:AIK95644.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
transposase IS116/IS110/IS902 family protein
SCNpilot_expt_500_p_scaffold_3622_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4771..6036
DNA (1266bp) protein (422aa)
Probable insertion sequence transposase protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q8KLE2_RHIEC rbh
Transposase {ECO:0000313|EMBL:AIL13888.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
putative insertion sequence transposase protein rbh
SCNpilot_expt_500_p_scaffold_3622_11
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6405..7886)
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1 RepID=C3GUE9_BACTU
Uncharacterized protein {ECO:0000313|EMBL:EEM74006.1}; TaxID=527029 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1.;"
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC
SCNpilot_expt_500_p_scaffold_3622_12
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8029..8541
DNA (513bp) protein (171aa)
MerR family transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029A336B
transcriptional regulator, MerR family
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
SCNpilot_expt_500_p_scaffold_3622_13
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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8531..9841
DNA (1311bp) protein (437aa)
copper-exporting ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Heavy metal translocating P-type ATPase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IZC8_9GAMM
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 13 items

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