name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1530_1
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10..945
|
transketolase domain-containing protein; K00615 transketolase [EC:2.2.1.1]
transketolase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000364E1D7
rbh
Transketolase {ECO:0000313|EMBL:KKC32238.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1530_2
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
948..1949
|
transketolase central region; K00615 transketolase [EC:2.2.1.1]
transketolase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037A39E4
rbh
Transketolase {ECO:0000313|EMBL:KKC32239.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1530_3
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1949..3073
|
RuBisCO-like protein; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
Ribulose bisphosphate carboxylase large chain n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUG5_9RHIZ
RuBisCO {ECO:0000313|EMBL:KKC32240.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1530_4
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3190..3588
|
Cupin 2 conserved barrel domain protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U7V5_SINMW
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ABR59735.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1530_5
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3633..3872)
|
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003696C48
Uncharacterized protein {ECO:0000313|EMBL:CDM62572.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1530_6
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3933..4202)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VUC1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AJD43002.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1530_7
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4326..4493
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D6B7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDN57827.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1530_8
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria
|
Not on your lists |
4554..5048
|
General stress protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRD8_HYPDA
General stress protein {ECO:0000313|EMBL:KIJ70970.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
general stress protein
|
|
SCNpilot_expt_1000_bf_scaffold_1530_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5125..8265)
|
Acr/RND family transmembrane transporter n=1 Tax=Rhizobium leguminosarum RepID=UPI00037C9C50
rbh
Cation/multidrug efflux pump {ECO:0000313|EMBL:EJC68215.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
Acr/RND family transmembrane transporter
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1530_10
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8292..9416)
|
Hemolysin secretion protein D n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FQV9_9RHIZ
Hemolysin secretion protein D {ECO:0000313|EMBL:ESX83043.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
RND family efflux transporter, MFP subunit
|
|
SCNpilot_expt_1000_bf_scaffold_1530_11
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9487..10089)
|
TetR family transcriptional regulator n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HAJ2_9RHIZ
rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:CDM59366.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
tetr1; HTH-type transcriptional regulator yhgD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1530_12
uncultured bacterium, Bacteria
|
Not on your lists |
comp(10252..11457)
|
Bcr/CflA family drug resistance transporter protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S385_RHIET
rbh
AAA domain protein {ECO:0000313|EMBL:AIA13136.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Bcr/CflA family drug resistance transporter protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1530_13
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11667..12344
|
TetR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00036F203B
rbh
Transcriptional regulator TetR family {ECO:0000313|EMBL:KEC71126.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
transcriptional regulator TetR family
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1530_14
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12454..12807
|
RNA signal recognition particle 4.5S RNA n=1 Tax=Rhizobium giardinii RepID=UPI000380062A
RNA signal recognition particle 4.5S RNA {ECO:0000313|EMBL:KGE01020.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1530_15
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12804..13931)
|
cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:ABR62297.1}; EC=2.1.1.79 {ECO:0000313|EMBL:ABR62297.1};; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UF67_SINMW
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1530_16
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14626..14844
|
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y032_MESOW
YbaK/prolyl-tRNA synthetase associated protein
YbaK/prolyl-tRNA synthetase associated region {ECO:0000313|EMBL:AEH89322.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1530_17
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14862..15218)
|
UPI0003D024CD related cluster n=1 Tax=unknown RepID=UPI0003D024CD
Cupin {ECO:0000313|EMBL:ESZ28557.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein; K06995
|
|
SCNpilot_expt_1000_bf_scaffold_1530_18
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15241..16638)
|
UPI0003D03F4F related cluster n=1 Tax=unknown RepID=UPI0003D03F4F
FAD-dependent oxidoreductase {ECO:0000313|EMBL:ESZ28556.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
FAD dependent oxidoreductase
|
|
SCNpilot_expt_1000_bf_scaffold_1530_19
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17075..17344
|
Peptidase {ECO:0000313|EMBL:EYR77361.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1530_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17385..18596)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C8B8_9RHIZ
rbh
Integral membrane sensor signal transduction histidine kinase
|
|
SCNpilot_expt_1000_bf_scaffold_1530_21
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18699..19364)
|
Transcriptional regulatory protein QseB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ER76_9RHIZ
rbh
Transcriptional regulatory protein QseB {ECO:0000313|EMBL:EYR77359.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
DNA-binding response regulator in two-component regulatory system
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1530_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19365..19706)
|
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036F8651
Peptidase {ECO:0000313|EMBL:EYR77360.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1530_23
Jannaschia aquimarina, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19846..20727
|
AlgE2 protein {ECO:0000313|EMBL:KIT14612.1}; EC=5.1.3.- {ECO:0000313|EMBL:KIT14612.1};; TaxID=935700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia aquimarina.;"
Hemolysin-type calcium-binding region, RTX n=1 Tax=Roseovarius sp. TM1035 RepID=A6DYK6_9RHOB
hemolysin-type calcium-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1530_24
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20929..21354
|
Site-specific recombinase, phage integrase family protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QUI4_9RHOB
Site-specific recombinase, phage integrase family protein {ECO:0000313|EMBL:EEE44113.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
integrase family protein
|
|
SCNpilot_expt_1000_bf_scaffold_1530_25
unknown
|
Not on your lists |
21324..21455
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1530_26
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21583..21720)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FCZ9_9RHIZ
Two component sensor histidine kinase protein
|