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SCNpilot_expt_1000_bf_scaffold_3519

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3519_1
unknown

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2..94
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3519_2
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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91..1092
DNA (1002bp) protein (334aa)
NAD+ synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
NH(3)-dependent NAD(+) synthetase n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4ILQ1_RHIML
SCNpilot_expt_1000_bf_scaffold_3519_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1123..2238)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI00035DCEB2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC75070.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3519_4
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2241..2963)
DNA (723bp) protein (241aa)
hemK; putative protoporphyrinogen oxidase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
methyltransferase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036F8127
Methyltransferase {ECO:0000313|EMBL:KDP72740.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_expt_1000_bf_scaffold_3519_5
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3350..4429
DNA (1080bp) protein (360aa)
cell-surface polysaccharide exporter protein PST family n=1 Tax=Rhizobium meliloti RepID=UPI00036DFFD4 rbh
Sugar transporter {ECO:0000313|EMBL:KDP72741.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
Membrane protein involved in the export of O-antigen and teichoic acid rbh
SCNpilot_expt_1000_bf_scaffold_3519_6
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4426..5562
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AFD5_RHIFH rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE99767.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_expt_1000_bf_scaffold_3519_7
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5673..7289
DNA (1617bp) protein (539aa)
Succinoglycan biosynthesis transport protein exoP n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AFD6_RHIFH rbh
Succinoglycan biosynthesis transport protein exoP rbh
Polysaccharide transporter {ECO:0000313|EMBL:CCE99768.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_expt_1000_bf_scaffold_3519_8
unknown

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comp(7445..7969)
DNA (525bp) protein (175aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3519_9
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8422..8715
DNA (294bp) protein (98aa)
Exopolysaccharide production protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X2D9_RHIFR
exopolysaccharide production protein
Exopolysaccharide production protein {ECO:0000313|EMBL:AFL50045.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_expt_1000_bf_scaffold_3519_10
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8708..9469
DNA (762bp) protein (254aa)
Polysaccharide deacetylase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KLR9_RHISN rbh
polysaccharide deacetylase rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:ACP23355.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCNpilot_expt_1000_bf_scaffold_3519_11
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9478..10752
DNA (1275bp) protein (425aa)
Putative glycosyltransferase protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AFD9_RHIFH rbh
Polysaccharide biosynthesis protein, putative {ECO:0000313|EMBL:AHK45554.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
putative glycosyltransferase protein rbh
SCNpilot_expt_1000_bf_scaffold_3519_12
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10721..12934)
DNA (2214bp) protein (738aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X2D3_RHIFR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFL50039.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_expt_1000_bf_scaffold_3519_13
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12946..13995)
DNA (1050bp) protein (350aa)
Probable mannan synthase 4 Cellulose synthase-like protein A4 OsCslA4 n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AFE2_RHIFH rbh
Glycosyl transferase {ECO:0000313|EMBL:KDP72749.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
mannan synthase 4 Cellulose synthase-like protein A4; OsCslA4 rbh
SCNpilot_expt_1000_bf_scaffold_3519_14
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14016..14417)
DNA (402bp) protein (134aa)
VanZ like family n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4ILS7_RHIML
Uncharacterized protein {ECO:0000313|EMBL:AHK45556.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
VanZ like family
SCNpilot_expt_1000_bf_scaffold_3519_15
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14414..15604)
DNA (1191bp) protein (397aa)
Putative glycosyltransferase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KLR7_RHISN rbh
glycosyltransferase rbh
Putative glycosyltransferase {ECO:0000313|EMBL:ACP23353.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCNpilot_expt_1000_bf_scaffold_3519_16
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15746..16105)
DNA (360bp) protein (120aa)
UPI0003CE4BA6 related cluster n=1 Tax=unknown RepID=UPI0003CE4BA6
ISXo8 transposase {ECO:0000313|EMBL:CDN55430.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
transposase
Displaying 16 items

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