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SCNpilot_expt_1000_bf_scaffold_14559

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_14559_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..376
DNA (375bp) protein (125aa)
Extracellular ligand-binding receptor n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UDG3_RHIRD
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EGP55491.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
extracellular ligand-binding receptor
SCNpilot_expt_1000_bf_scaffold_14559_2
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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452..574
DNA (123bp) protein (41aa)
Inner-membrane translocator n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XCC3_RHIFR
natD; inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AFL53529.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_expt_1000_bf_scaffold_14559_3
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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582..1325
DNA (744bp) protein (248aa)
ABC transporter permease n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003810566 rbh
natD; inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:AFL53529.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_expt_1000_bf_scaffold_14559_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1328..2284
DNA (957bp) protein (319aa)
High-affinity branched-chain amino acid transport system permease protein LivM n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXP0_9RHIZ
High-affinity branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:EYR78762.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
braE2; high-affinity branched-chain amino acid transport system permease BraE rbh
SCNpilot_expt_1000_bf_scaffold_14559_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2281..3759
DNA (1479bp) protein (493aa)
High-affinity branched-chain amino acid transport ATP-binding protein LivF n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D212_9RHIZ
High-affinity branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:EYR78764.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
livF7; high-affinity branched-chain amino acid transport ATP-binding protein LivF
SCNpilot_expt_1000_bf_scaffold_14559_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3764..5692
DNA (1929bp) protein (643aa)
Fatty acid oxidation complex subunit alpha {ECO:0000313|EMBL:EYR78765.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EYR78765.1};; EC=5.1.2.3 {ECO:0000313|EMBL:EYR78765.1};; EC=5.3.3.8 {ECO:0000313|EMBL:EYR78765.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
fadB1; fatty acid oxidation complex subunit alpha (EC:4.2.1.17 5.1.2.3)
Fatty acid oxidation complex subunit alpha n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EYB4_9RHIZ
Displaying 6 items

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