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SCNpilot_expt_1000_bf_scaffold_4453

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4453_1
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1038
DNA (1038bp) protein (346aa)
Xaa-Pro dipeptidase; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9]
Xaa-Pro aminopeptidase n=1 Tax=Rhizobium sp. CF122 RepID=J3BSI6_9RHIZ
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:EJL57281.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
SCNpilot_expt_1000_bf_scaffold_4453_2
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1144..1866
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5RZ95_RHIET
Uncharacterized protein {ECO:0000313|EMBL:KGE01083.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4453_3
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1993..2433
DNA (441bp) protein (147aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; A
prsAch; ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
ribose-phosphate pyrophosphokinase n=1 Tax=Rhizobium giardinii RepID=UPI00036268A3
SCNpilot_expt_1000_bf_scaffold_4453_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2372..2887
DNA (516bp) protein (172aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp.
prsA; ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EU42_9RHIZ
SCNpilot_expt_1000_bf_scaffold_4453_5
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3259..4086
DNA (828bp) protein (276aa)
Mlr2866 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98HH5_RHILO
hypothetical protein
Mlr2866 protein {ECO:0000313|EMBL:BAB49891.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_4453_6
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4120..5577)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B45154 rbh
Uncharacterized protein {ECO:0000313|EMBL:AJD41976.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4453_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5665..7800)
DNA (2136bp) protein (712aa)
Putative GGDEF/EAL transmembrane sensory box protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MDL9_RHIL3 rbh
diguanylate cyclase rbh
Putative GGDEF/EAL transmembrane sensory box protein {ECO:0000313|EMBL:CAK08958.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_expt_1000_bf_scaffold_4453_8
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8091..8690
DNA (600bp) protein (200aa)
50S ribosomal protein L25 n=1 Tax=Rhizobium sp. CF142 RepID=J1SL23_9RHIZ rbh
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 rbh
SCNpilot_expt_1000_bf_scaffold_4453_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8942..9571
DNA (630bp) protein (210aa)
Putative GGDEF/EAL transmembrane sensory box protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U5M1_9RHIZ
GGDEF domain-containing protein
Putative GGDEF/EAL transmembrane sensory box protein {ECO:0000313|EMBL:ENN87919.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Displaying 9 items

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