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SCNpilot_expt_1000_bf_scaffold_6415

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6415_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..337
DNA (336bp) protein (112aa)
Heavy metal translocating P-type ATPase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UH53_RHIRD
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CDN95369.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
heavy metal translocating P-type ATPase protein
SCNpilot_expt_1000_bf_scaffold_6415_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(514..1443)
DNA (930bp) protein (310aa)
Phosphate acetyltransferase Pta {ECO:0000313|EMBL:EYR84451.1}; EC=2.3.1.8 {ECO:0000313|EMBL:EYR84451.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Phosphate acetyltransferase Pta n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D421_9RHIZ rbh
pta; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
SCNpilot_expt_1000_bf_scaffold_6415_3
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1707..2963
DNA (1257bp) protein (419aa)
rbcL; ribulose bisphosphate carboxylaseoxygenase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] rbh
ribulose bisphosphate carboxylase n=1 Tax=Rhizobium giardinii RepID=UPI00036E538A rbh
Ribulose 1,5-bisphosphate carboxylase, large subunit {ECO:0000313|EMBL:EJJ27724.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
SCNpilot_expt_1000_bf_scaffold_6415_4
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2969..4303
DNA (1335bp) protein (445aa)
Hrp-dependent type III effector protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3J1G9_9RHIZ
Hrp-dependent type III effector protein {ECO:0000313|EMBL:EMG52816.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
Hrp-dependent type III effector protein
SCNpilot_expt_1000_bf_scaffold_6415_5
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4401..5213
DNA (813bp) protein (271aa)
Prephenate dehydrogenase n=1 Tax=Rhizobium sp. AP16 RepID=J2L1Q0_9RHIZ
hypothetical protein
Semialdehyde dehydrogenase {ECO:0000313|EMBL:KEA08954.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_expt_1000_bf_scaffold_6415_6
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5298..6224
DNA (927bp) protein (309aa)
HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor Pur regulon repressor n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AEK8_RHIFH
HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor; K10439 ribose transport system substrate-binding protein
Ribose ABC transporter periplasmic ribose-binding protein {ECO:0000313|EMBL:CCE99490.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_expt_1000_bf_scaffold_6415_7
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6401..6814
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D362_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHK46809.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
hypothetical protein
Displaying 7 items

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