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scnpilot_solids2_trim150_scaffold_6297

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_6297_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(150..491)
DNA (342bp) protein (114aa)
RNA polymerase-binding protein RbpA n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAL6_NAKMY
hypothetical protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_6297_2
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(628..1392)
DNA (765bp) protein (255aa)
tdk; Thymidine kinase (EC:2.7.1.21)
Thymidine kinase {ECO:0000313|EMBL:CCH31587.1}; EC=2.7.1.21 {ECO:0000313|EMBL:CCH31587.1};; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Thymidine kinase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K220_SACES
scnpilot_solids2_trim150_scaffold_6297_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(1436..2191)
DNA (756bp) protein (252aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAL4_NAKMY
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ACV79267.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_6297_4
unknown

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2837..3523
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B43111
scnpilot_solids2_trim150_scaffold_6297_5
unknown

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3774..4442
DNA (669bp) protein (223aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_6297_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4536..5147)
DNA (612bp) protein (204aa)
Sugar phosphatase YfbT {ECO:0000313|EMBL:KJL29039.1}; EC=3.1.3.23 {ECO:0000313|EMBL:KJL29039.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) RepID=D5UUV1_TSUPD
HAD-superfamily hydrolase
scnpilot_solids2_trim150_scaffold_6297_7
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5216..5965)
DNA (750bp) protein (250aa)
Glucose sorbosone dehydrogenase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZ76_CELFA
glucose sorbosone dehydrogenase
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:AEE47192.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
scnpilot_solids2_trim150_scaffold_6297_8
unknown

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6011..6379
DNA (369bp) protein (123aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_6297_9
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6453..7922)
DNA (1470bp) protein (490aa)
major facilitator transporter n=1 Tax=Humibacter albus RepID=UPI0003B2E82A rbh
Major facilitator transporter {ECO:0000313|EMBL:EWT07958.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
MFS transporter, sugar porter family rbh
scnpilot_solids2_trim150_scaffold_6297_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(8033..8299)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIS9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43166.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Displaying 10 items

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