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scnpilot_solids2_trim150_scaffold_2551

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2551_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..210)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003620945
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABL83941.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids2_trim150_scaffold_2551_2
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

598..1647
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B75854
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
scnpilot_solids2_trim150_scaffold_2551_3
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1686..2858)
DNA (1173bp) protein (391aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
peptidase M24 id=14631820 bin=bin9_gal15 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
scnpilot_solids2_trim150_scaffold_2551_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2994..4493
DNA (1500bp) protein (500aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] rbh
Amidase id=4599606 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
scnpilot_solids2_trim150_scaffold_2551_5
Jonquetella anthropi, Jonquetella, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

4744..5484
DNA (741bp) protein (247aa)
Endoribonuclease L-PSP, putative n=3 Tax=Jonquetella RepID=H0UIU8_9BACT
Endoribonuclease L-PSP, putative {ECO:0000313|EMBL:EHM12742.1}; TaxID=885272 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Jonquetella.;" source="Jonquetella anthropi DSM 22815.;"
endoribonuclease L-PSP; K07567 TdcF protein
scnpilot_solids2_trim150_scaffold_2551_6
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5494..6249)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI000381D056
Uncharacterized protein {ECO:0000313|EMBL:EJJ04350.1}; TaxID=1160718 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
hypothetical protein; K07090
scnpilot_solids2_trim150_scaffold_2551_7
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6292..8436)
DNA (2145bp) protein (715aa)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTB0_ACIC1 rbh
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase rbh
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein {ECO:0000313|EMBL:ABK52670.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
scnpilot_solids2_trim150_scaffold_2551_8
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8433..8900)
DNA (468bp) protein (156aa)
(2Fe-2S)-binding domain protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTA9_ACIC1
Isoquinoline 1-oxidoreductase {ECO:0000313|EMBL:EWM12579.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
2Fe-2S iron-sulfur cluster binding domain-containing protein
scnpilot_solids2_trim150_scaffold_2551_9
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8845..9828)
DNA (984bp) protein (328aa)
6-phosphogluconate dehydrogenase, NAD-binding protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQ87_NOCSJ rbh
6-phosphogluconate dehydrogenase rbh
6-phosphogluconate dehydrogenase, NAD-binding protein {ECO:0000313|EMBL:ABL83972.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids2_trim150_scaffold_2551_10
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9909..10967)
DNA (1059bp) protein (353aa)
Amino acid ABC transporter permease protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IYM2_POLGS rbh
amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein rbh
Amino acid ABC transporter permease protein {ECO:0000313|EMBL:ADZ69469.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids2_trim150_scaffold_2551_11
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(10964..11839)
DNA (876bp) protein (292aa)
Amino acid ABC transporter permease protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IYM3_POLGS
amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
Tax=RBG_16_Chloroflexi_48_8_curated
scnpilot_solids2_trim150_scaffold_2551_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11836..12576)
DNA (741bp) protein (247aa)
High-affinity branched-chain amino acid transport ATP-binding protein BraG n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZI4_9RHIZ
High-affinity branched-chain amino acid transport ATP-binding protein BraG {ECO:0000313|EMBL:EYR77426.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
branched-chain amino acid transport ATP-binding protein LivF; K01996 branched-chain amino acid transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_2551_13
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12573..13379)
DNA (807bp) protein (269aa)
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IYM5_POLGS
branched-chain amino acid ABC transporter ATPase; K01995 branched-chain amino acid transport system ATP-binding protein
ABC-type branched-chain amino acid transport systems, ATPase component {ECO:0000313|EMBL:ADZ69472.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids2_trim150_scaffold_2551_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13376..13813)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036506AA
endoribonuclease L-PSP; K07567 TdcF protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
scnpilot_solids2_trim150_scaffold_2551_15
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(13913..15286)
DNA (1374bp) protein (458aa)
ABC-type branched-chain amino acid transporter periplasmic amino acid-binding protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IYM6_POLGS rbh
branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
Tax=RBG_16_Chloroflexi_48_8_curated
scnpilot_solids2_trim150_scaffold_2551_16
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15659..16735
DNA (1077bp) protein (359aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LT96_ACIC1 rbh
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase rbh
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ABK52656.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
scnpilot_solids2_trim150_scaffold_2551_17
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16746..17738)
DNA (993bp) protein (331aa)
Transcriptional regulator, LacI family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTA5_ACIC1 rbh
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABK52665.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
scnpilot_solids2_trim150_scaffold_2551_18
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17903..18661)
DNA (759bp) protein (253aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTA6_ACIC1
Uncharacterized protein {ECO:0000313|EMBL:EWM18290.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein
scnpilot_solids2_trim150_scaffold_2551_19
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18900..19544)
DNA (645bp) protein (215aa)
Carboxymuconolactone decarboxylase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTA4_ACIC1 rbh
carboxymuconolactone decarboxylase rbh
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ABK52664.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
scnpilot_solids2_trim150_scaffold_2551_20
Candidatus Aquiluna sp. IMCC13023, Candidatus Aquiluna, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19661..20374)
DNA (714bp) protein (238aa)
GntR family transcriptional regulator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B2E5CD
Uncharacterized protein {ECO:0000313|EMBL:EIC91173.1}; TaxID=1081644 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Luna cluster; Luna-1 subcluster; Candidatus Aquiluna.;" source="Candidatus Aquiluna sp. IMCC13023.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_2551_21
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20524..21900
DNA (1377bp) protein (459aa)
Succinate-semialdehyde dehydrogenase [NAD] {ECO:0000313|EMBL:EPR76362.1}; EC=1.2.1.16 {ECO:0000313|EMBL:EPR76362.1};; EC=1.2.1.24 {ECO:0000313|EMBL:EPR76362.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
succinate-semialdehyde dehydrogenase (NAD(P)(+)); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] rbh
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) id=7721101 bin=CNBR_ACT species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
scnpilot_solids2_trim150_scaffold_2551_22
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22389..23489
DNA (1101bp) protein (367aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQ55_NOCSJ rbh
extracellular ligand-binding receptor rbh
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABL83940.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids2_trim150_scaffold_2551_23
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23486..24370
DNA (885bp) protein (295aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQ54_NOCSJ rbh
inner-membrane translocator rbh
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ABL83939.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids2_trim150_scaffold_2551_24
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24367..26214
DNA (1848bp) protein (616aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQ53_NOCSJ rbh
Branched chain amino acid ABC transporter {ECO:0000313|EMBL:CDO21058.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
ABC transporter-like protein rbh
scnpilot_solids2_trim150_scaffold_2551_25
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26214..26945
DNA (732bp) protein (244aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQ52_NOCSJ rbh
ABC transporter-like protein rbh
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ABL83937.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids2_trim150_scaffold_2551_26
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27004..27810)
DNA (807bp) protein (269aa)
dehydrogenase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036ECD89
dehydrogenase
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EHR02455.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
scnpilot_solids2_trim150_scaffold_2551_27
unknown

Not on your lists

comp(27912..28004)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 27 items

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