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scnpilot_solids2_trim150_scaffold_2810

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2810_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..825)
DNA (825bp) protein (275aa)
Aminotransferase class-III n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XK30_NAKMY
hypothetical protein
Aminotransferase class-III {ECO:0000313|EMBL:ACV76713.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_2810_2
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(886..1395)
DNA (510bp) protein (170aa)
AsnC family transcriptional regulator n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0H7J8_STRA9
AsnC family transcriptional regulator {ECO:0000313|EMBL:AJT64091.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
AsnC family transcriptional regulator
scnpilot_solids2_trim150_scaffold_2810_3
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1548..2801
DNA (1254bp) protein (418aa)
ABC transporter substrate-binding protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003770D9E
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWT01474.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
extracellular solute-binding protein; K11069 spermidine/putrescine transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_2810_4
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2822..3967
DNA (1146bp) protein (382aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
potA1; Spermidine/putrescine import ATP-binding protein PotA (EC:3.6.3.31)
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4R1X1_9ACTO
scnpilot_solids2_trim150_scaffold_2810_5
Streptomyces sp. e14, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4026..4952
DNA (927bp) protein (309aa)
ABC transporter permease n=1 Tax=Streptomyces sp. LaPpAH-108 RepID=UPI00037EDD57 rbh
Putrescine transporter {ECO:0000313|EMBL:EFF93394.2}; TaxID=645465 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. e14.;"
polyamine ABC-transporter integral membrane protein rbh
scnpilot_solids2_trim150_scaffold_2810_6
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4953..5801
DNA (849bp) protein (283aa)
ABC transporter permease n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0H2B6_STRA9 rbh
ABC transporter permease {ECO:0000313|EMBL:EXU88520.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
ABC transporter permease; K11070 spermidine/putrescine transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_2810_7
Streptomyces sp. PVA 94-07, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5931..7349
DNA (1419bp) protein (473aa)
FAD-dependent oxidoreductase n=1 Tax=Streptomyces sp. CNY228 RepID=UPI0003645AE5 rbh
Oxidoreductase {ECO:0000313|EMBL:ESQ05393.1}; TaxID=1223307 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PVA 94-07.;"
FAD dependent oxidoreductase rbh
scnpilot_solids2_trim150_scaffold_2810_8
Streptomyces sp. Tu6071, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7403..9607
DNA (2205bp) protein (735aa)
Putative Saccharopine dehydrogenase n=1 Tax=Streptomyces sp. Tu6071 RepID=F3ZJG4_9ACTO
Putative Saccharopine dehydrogenase {ECO:0000313|EMBL:EGJ73049.1}; TaxID=355249 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu6071.;"
saccharopine dehydrogenase
scnpilot_solids2_trim150_scaffold_2810_9
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9640..10989)
DNA (1350bp) protein (450aa)
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] rbh
Aminotransferase class-III n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SEB9_INTC7 rbh
Aminotransferase {ECO:0000313|EMBL:EWT01227.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
scnpilot_solids2_trim150_scaffold_2810_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11165..11701)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKD7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22484.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
scnpilot_solids2_trim150_scaffold_2810_11
Mycobacterium setense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11778..12515)
DNA (738bp) protein (246aa)
Quinone oxidoreductase n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0UR02_MYCFO
NAD(P)H-quinone oxidoreductase {ECO:0000313|EMBL:KHO22186.1}; TaxID=431269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium setense.;"
quinone oxidoreductase
scnpilot_solids2_trim150_scaffold_2810_12
unknown

Not on your lists

12572..12757
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2810_13
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12788..13519)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Nocardiopsis baichengensis RepID=UPI00034B7247
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR67037.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_2810_14
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13532..14221)
DNA (690bp) protein (230aa)
deoxyribose-phosphate aldolase; K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4] rbh
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI000346F352
scnpilot_solids2_trim150_scaffold_2810_15
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14218..15174)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Nocardiopsis chromatogenes RepID=UPI000345F781
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66559.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
ribokinase-like domain-containing protein
scnpilot_solids2_trim150_scaffold_2810_16
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15456..16190
DNA (735bp) protein (245aa)
inosine/uridine-preferring nucleoside hydrolase; K01239 purine nucleosidase [EC:3.2.2.1]
nucleoside hydrolase n=1 Tax=Nocardiopsis potens RepID=UPI00034A1FDA
Inosine/uridine-preferring nucleoside hydrolase {ECO:0000313|EMBL:ADH69771.1}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
scnpilot_solids2_trim150_scaffold_2810_17
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16166..16402
DNA (237bp) protein (79aa)
inosine/uridine-preferring nucleoside hydrolase; K01239 purine nucleosidase [EC:3.2.2.1]
nucleoside hydrolase n=1 Tax=Nocardiopsis synnemataformans RepID=UPI00034C4804
Inosine/uridine-preferring nucleoside hydrolase {ECO:0000313|EMBL:ADH69771.1}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
scnpilot_solids2_trim150_scaffold_2810_18
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16530..17423
DNA (894bp) protein (298aa)
Dihydrodipicolinate synthase n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JTD1_STRHJ rbh
Dihydrodipicolinate synthase {ECO:0000313|EMBL:KDN73119.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
dihydrodipicolinate synthase rbh
Displaying 18 items

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