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scnpilot_solids2_trim150_scaffold_4578

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4578_1
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..705)
DNA (705bp) protein (235aa)
NADPH:quinone reductase n=2 Tax=Mycobacterium avium RepID=V7LG97_MYCAV
NADPH:quinone reductase {ECO:0000313|EMBL:ETB21824.1}; TaxID=1391991 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. avium 10-9275.;"
putative oxidoreductase
scnpilot_solids2_trim150_scaffold_4578_2
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(953..1660)
DNA (708bp) protein (236aa)
Transcriptional regulator, HxlR family n=1 Tax=Micromonospora sp. (strain L5) RepID=E8S8U7_MICSL rbh
HxlR family transcriptional regulator rbh
Helix-turn-helix HxlR type {ECO:0000313|EMBL:ADL44986.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
scnpilot_solids2_trim150_scaffold_4578_3
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1772..2635
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI0003645A22 rbh
type 11 methyltransferase rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN34325.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
scnpilot_solids2_trim150_scaffold_4578_4
unknown

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2660..3436
DNA (777bp) protein (259aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4578_5
unknown

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3385..3978
DNA (594bp) protein (198aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4578_6
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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4113..4565
DNA (453bp) protein (151aa)
Lactoylglutathione lyase family protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2PZI6_9DELT
Lactoylglutathione lyase family protein {ECO:0000313|EMBL:EIG52942.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4578_7
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4692..5873
DNA (1182bp) protein (394aa)
peptidase M20D family protein; K01451 hippurate hydrolase [EC:3.5.1.32] rbh
amidohydrolase n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B63AC1 rbh
Amidohydrolase {ECO:0000313|EMBL:CCH73633.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
scnpilot_solids2_trim150_scaffold_4578_8
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5870..6940
DNA (1071bp) protein (357aa)
pyridoxal-5'-phosphate-dependent protein subunit beta; K01751 diaminopropionate ammonia-lyase [EC:4.3.1.15] rbh
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00038135E1 rbh
Diaminopropionate ammonia-lyase {ECO:0000313|EMBL:KKA40980.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
scnpilot_solids2_trim150_scaffold_4578_9
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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6977..7417
DNA (441bp) protein (147aa)
Ferric-uptake regulator n=1 Tax=Nocardioides sp. CF8 RepID=R7XX51_9ACTO
Ferric-uptake regulator {ECO:0000313|EMBL:EON23914.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
ferric-uptake regulator; K03711 Fur family transcriptional regulator, ferric uptake regulator
scnpilot_solids2_trim150_scaffold_4578_10
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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7473..8063
DNA (591bp) protein (197aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
catalase; K03781 catalase [EC:1.11.1.6]
catalase n=1 Tax=Mycobacterium sp. 155 RepID=UPI0003714931
Displaying 10 items

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