ggKbase home page

scnpilot_solids2_trim150_scaffold_4968

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4968_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..771
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003620945
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABL83941.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids2_trim150_scaffold_4968_2
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

899..1246
DNA (348bp) protein (116aa)
Cupin 2, conserved barrel domain protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LT97_ACIC1
cupin
Cupin 2, conserved barrel domain protein {ECO:0000313|EMBL:ABK52657.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
scnpilot_solids2_trim150_scaffold_4968_3
Komagataeibacter rhaeticus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1919..2422
DNA (504bp) protein (168aa)
Putative oxidoreductase CzcO-like protein n=1 Tax=Gluconacetobacter sp. SXCC-1 RepID=F3S6H6_9PROT
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KDU97291.1}; TaxID=1432055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter rhaeticus AF1.;"
FAD dependent oxidoreductase; K07222 putative flavoprotein involved in K+ transport
scnpilot_solids2_trim150_scaffold_4968_4
Candidatus Aquiluna sp. IMCC13023, Candidatus Aquiluna, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2580..3512
DNA (933bp) protein (311aa)
6-phosphogluconate dehydrogenase, NAD-binding n=1 Tax=Candidatus Aquiluna sp. IMCC13023 RepID=I0QZZ8_9MICO rbh
6-phosphogluconate dehydrogenase, NAD-binding {ECO:0000313|EMBL:EIC91184.1}; TaxID=1081644 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Luna cluster; Luna-1 subcluster; Candidatus Aquiluna.;" source="Candidatus Aquiluna sp. IMCC13023.;"
6-phosphogluconate dehydrogenase
scnpilot_solids2_trim150_scaffold_4968_5
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3509..4744
DNA (1236bp) protein (412aa)
Peptidase M24 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQ86_NOCSJ rbh
peptidase M24 rbh
Peptidase M24 {ECO:0000313|EMBL:ABL83971.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids2_trim150_scaffold_4968_6
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4771..5442)
DNA (672bp) protein (224aa)
Transcriptional regulator, GntR family n=2 Tax=Rhodococcus RepID=C3JP82_RHOER
GntR family transcriptional regulator {ECO:0000313|EMBL:EME14928.1}; TaxID=1278077 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii BKS 20-40.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_4968_7
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5530..6234)
DNA (705bp) protein (235aa)
cytosine deaminase or related metal-dependent hydrolase (EC:3.5.4.-)
Cytosine deaminase or related metal-dependent hydrolase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K444_CUPNH
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62050.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
scnpilot_solids2_trim150_scaffold_4968_8
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6174..6848)
DNA (675bp) protein (225aa)
cytosine deaminase or related metal-dependent hydrolase (EC:3.5.4.-)
Cytosine deaminase or related metal-dependent hydrolase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K444_CUPNH
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62050.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
Displaying 8 items

View Taxonomy