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scnpilot_solids2_trim150_scaffold_15778

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_15778_1
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..305)
DNA (303bp) protein (101aa)
hypothetical protein; K00848 rhamnulokinase [EC:2.7.1.5]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030BABC8
Uncharacterized protein {ECO:0000313|EMBL:EQM72749.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
scnpilot_solids2_trim150_scaffold_15778_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(333..506)
DNA (174bp) protein (58aa)
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RM04_LEIAQ
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase {ECO:0000313|EMBL:ERK69589.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rhaD; rhamnulose-1-phosphate aldolase
scnpilot_solids2_trim150_scaffold_15778_3
unknown

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1367..1621
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_15778_4
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1875..2312)
DNA (438bp) protein (146aa)
Short chain dehydrogenase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VQ55_9ACTO
short chain dehydrogenase
Short chain dehydrogenase {ECO:0000313|EMBL:AGZ38944.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
scnpilot_solids2_trim150_scaffold_15778_5
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2318..3382)
DNA (1065bp) protein (355aa)
L-rhamnose isomerase n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FJP5_MYCSM
Rhamnose isomerase {ECO:0000313|EMBL:KHK97111.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
L-rhamnose isomerase
scnpilot_solids2_trim150_scaffold_15778_6
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3379..3657)
DNA (279bp) protein (93aa)
hypothetical protein; K03534 L-rhamnose mutarotase [EC:5.1.3.-]
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI0003751339
L-rhamnose 1-epimerase {ECO:0000313|EMBL:KHK97113.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
scnpilot_solids2_trim150_scaffold_15778_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3647..4792)
DNA (1146bp) protein (382aa)
Rhamnose ABC transporter, rhamnose-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RRK6_LEIAQ rbh
Rhamnose ABC transporter, rhamnose-binding protein {ECO:0000313|EMBL:ERK71446.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sugar ABC transporter periplasmic protein rbh
scnpilot_solids2_trim150_scaffold_15778_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4856..5266)
DNA (411bp) protein (137aa)
Putative autoinducer 2 ABC transporter, permease protein LsrD n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T9T2_LEIAQ
Putative autoinducer 2 ABC transporter, permease protein LsrD {ECO:0000313|EMBL:ERK71447.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ribose/xylose/arabinose/galactoside ABC transporters, permease components
Displaying 8 items

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