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scnpilot_solids2_trim150_scaffold_5406

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5406_1
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..1025)
DNA (1023bp) protein (341aa)
1,2-phenylacetyl-CoA epoxidase, subunit E {ECO:0000313|EMBL:KJL23263.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJL23263.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI000373AAEB
flavodoxin reductase (ferredoxin-NADPH reductase) family 1; K02613 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
scnpilot_solids2_trim150_scaffold_5406_2
Streptomyces coelicolor, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1028..1576)
DNA (549bp) protein (183aa)
Putative phenylacetic acid degradation protein PaaD n=1 Tax=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) RepID=Q93JC2_STRCO
paaD, SCBAC17A6.07; phenylacetic acid degradation protein PaaD; K02612 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
Putative phenylacetic acid degradation protein PaaD {ECO:0000313|EMBL:CAC44652.1}; TaxID=100226 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group.;" source="Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).;"
scnpilot_solids2_trim150_scaffold_5406_3
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1570..2355)
DNA (786bp) protein (262aa)
phenylacetate-CoA oxygenase subunit PaaI; K02611 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
Phenylacetate-CoA oxygenase, PaaI subunit n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JZX2_ARTS2
Phenylacetate-CoA oxygenase {ECO:0000313|EMBL:KHL05649.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
scnpilot_solids2_trim150_scaffold_5406_4
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2352..2681)
DNA (330bp) protein (110aa)
Phenylacetate-CoA oxygenase subunit PaaB n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0HRK8_STRA9
Phenylacetate-CoA oxygenase subunit PaaB {ECO:0000313|EMBL:AIA04649.1}; TaxID=68570 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus.;"
phenylacetate-CoA oxygenase subunit PaaH; K02610 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
scnpilot_solids2_trim150_scaffold_5406_5
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2769..3605)
DNA (837bp) protein (279aa)
phenylacetate-CoA oxygenase subunit PaaA n=1 Tax=Streptomyces sp. LaPpAH-108 RepID=UPI00035D7130
Phenylacetate-CoA oxygenase subunit PaaA {ECO:0000313|EMBL:EJJ06322.1}; TaxID=1160718 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
Phenylacetate-CoA oxygenase, PaaG subunit
scnpilot_solids2_trim150_scaffold_5406_6
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3676..4113
DNA (438bp) protein (146aa)
paaI, SCBAC17A6.03c; phenylacetic acid degradation protein PaaI; K02614 acyl-CoA thioesterase [EC:3.1.2.-]
phenylacetic acid degradation protein PaaI n=1 Tax=Streptomyces sp. TOR3209 RepID=UPI0003656FF9
Uncharacterized protein {ECO:0000313|EMBL:KDS88726.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
scnpilot_solids2_trim150_scaffold_5406_7
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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4161..5474
DNA (1314bp) protein (438aa)
paaK; phenylacetyl-CoA ligase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30]
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444, ECO:0000313|EMBL:CCG03692.1};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
Phenylacetyl-CoA ligase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RKS6_BLASD
scnpilot_solids2_trim150_scaffold_5406_8
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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5471..6115
DNA (645bp) protein (215aa)
Regulatory protein TetR n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IXI5_9PSEU
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADB74612.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
scnpilot_solids2_trim150_scaffold_5406_9
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6093..6695)
DNA (603bp) protein (201aa)
bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; K02618 oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.7.1.16 1.17.1.7]
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037BB55E
Bifunctional protein PaaZ {ECO:0000313|EMBL:KJQ56036.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
scnpilot_solids2_trim150_scaffold_5406_10
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6700..7980)
DNA (1281bp) protein (427aa)
bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; K02618 oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.7.1.16 1.17.1.7]
Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase n=1 Tax=Mycobacterium abscessus M93 RepID=I0PED6_MYCAB
Putative phenylacetic acid degradation protein PaaN {ECO:0000313|EMBL:CAM60994.1}; TaxID=561007 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus (strain ATCC 19977 / DSM 44196).;"
scnpilot_solids2_trim150_scaffold_5406_11
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7988..8878)
DNA (891bp) protein (297aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Agromyces subbeticus RepID=UPI0003B66F20
Putative 3-hydroxybutyryl-CoA dehydrogenase PaaH {ECO:0000313|EMBL:GAB12028.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12137.;"
scnpilot_solids2_trim150_scaffold_5406_12
Kocuria polaris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9038..9322)
DNA (285bp) protein (95aa)
beta-ketoadipyl CoA thiolase (EC:2.3.1.9)
acetyl-CoA acetyltransferase n=1 Tax=Kocuria sp. UCD-OTCP RepID=UPI00036A832D
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:KHD97116.1}; TaxID=136273 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria polaris.;"
scnpilot_solids2_trim150_scaffold_5406_13
Arthrobacter sp. IHBB 11108, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9267..10202)
DNA (936bp) protein (312aa)
3-ketoacyl-CoA thiolase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]
acetyl-CoA acetyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002E62411
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:AJT41915.1}; TaxID=1618207 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. IHBB 11108.;"
scnpilot_solids2_trim150_scaffold_5406_14
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10400..11371
DNA (972bp) protein (324aa)
mycothiol-dependent formaldehyde dehydrogenase; K00153 S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
alcohol dehydrogenase n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI000378A4A0
Alcohol dehydrogenase {ECO:0000313|EMBL:EYT56103.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
scnpilot_solids2_trim150_scaffold_5406_15
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11406..12050)
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Gordonia neofelifaecis NRRL B-59395 RepID=F1YNL8_9ACTO rbh
Deaminase/reductase {ECO:0000313|EMBL:EWT01262.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
RibD C-terminal domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_5406_16
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(12184..12321)
DNA (138bp) protein (46aa)
LuxR family transcriptional regulator n=1 Tax=Glaciibacter superstes RepID=UPI0003B62027
LuxR response regulator receiver
Regulatory protein, LuxR:Response regulator receiver {ECO:0000313|EMBL:AAZ55850.1}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
Displaying 16 items

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