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scnpilot_solids1_trim150_scaffold_1108_curated

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1108_curated_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(120..611)
DNA (492bp) protein (164aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
scnpilot_solids1_trim150_scaffold_1108_curated_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(972..1322)
DNA (351bp) protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG92794.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_1108_curated_3
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1780..2034
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI0003657B4A
Uncharacterized protein {ECO:0000313|EMBL:ESA36643.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;"
scnpilot_solids1_trim150_scaffold_1108_curated_4
unknown

Not on your lists

2234..3493
DNA (1260bp) protein (420aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1108_curated_5
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3644..4300)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FPV0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX82451.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1108_curated_6
Marinobacter sp. ELB17, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4429..5085)
DNA (657bp) protein (219aa)
peroxidase n=1 Tax=Leucothrix mucor RepID=UPI0003B5D198
Thiol-specific antioxidant protein {ECO:0000313|EMBL:EAZ98473.1}; TaxID=270374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. ELB17.;"
thiol-specific antioxidant protein
scnpilot_solids1_trim150_scaffold_1108_curated_7
unknown

Not on your lists

5572..6798
DNA (1227bp) protein (409aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1108_curated_8
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6804..7169)
DNA (366bp) protein (122aa)
TfoX domain-containing protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E0J2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EXJ13937.1}; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1108_curated_9
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(7329..7811)
DNA (483bp) protein (161aa)
OsmC family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPQ9_9BACT
redox protein, regulator of disulfide bond formation
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
scnpilot_solids1_trim150_scaffold_1108_curated_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8317..9645)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035DAB51
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:AHG92415.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
scnpilot_solids1_trim150_scaffold_1108_curated_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9731..11050)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000372355A
FAD dependent oxidoreductase {ECO:0000313|EMBL:AHG92413.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1108_curated_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11047..12000)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI0003626022
Proline racemase {ECO:0000313|EMBL:AHG92412.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
proline racemase
scnpilot_solids1_trim150_scaffold_1108_curated_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12006..12911)
DNA (906bp) protein (302aa)
dihydrodipicolinate synthase family protein; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035DAD15
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:AHG92416.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_1108_curated_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12947..14398)
DNA (1452bp) protein (484aa)
Aldehyde Dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Aldehyde Dehydrogenase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDX8_THET1
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AHG92411.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_1108_curated_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14462..15217)
DNA (756bp) protein (252aa)
Probable transcriptional regulator, GntR family n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NWQ8_CHRVO
GntR domain protein {ECO:0000313|EMBL:AHG92410.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
GntR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1108_curated_16
Brevibacillus sp. BC25, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15361..17667)
DNA (2307bp) protein (769aa)
dipeptidyl-peptidase (EC:3.4.14.-)
peptidase S9 n=1 Tax=Brevibacillus brevis RepID=UPI0003606783
Dipeptidyl peptidase IV (DPP IV)/prolyl oligopeptidase family protein {ECO:0000313|EMBL:EJL21033.1}; TaxID=1144308 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. BC25.;"
scnpilot_solids1_trim150_scaffold_1108_curated_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17746..19032)
DNA (1287bp) protein (429aa)
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG93619.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_1108_curated_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19079..22111)
DNA (3033bp) protein (1011aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA6_GEMAT
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG93618.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative outer membrane protein
scnpilot_solids1_trim150_scaffold_1108_curated_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(22511..22879)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5K0_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ37516.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
scnpilot_solids1_trim150_scaffold_1108_curated_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22905..23510)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M7_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37187.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_1108_curated_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23534..24073)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QRK8_9DELT
GAF domain protein {ECO:0000313|EMBL:AHG88824.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein; K07170 GAF domain-containing protein
scnpilot_solids1_trim150_scaffold_1108_curated_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24130..24579)
DNA (450bp) protein (150aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M5_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH37185.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_1108_curated_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24764..25216
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE45_GEMAT
Nuclear protein SET {ECO:0000313|EMBL:AHG89526.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein; K07117
scnpilot_solids1_trim150_scaffold_1108_curated_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25476..26144
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAB6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39714.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Displaying 24 items

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