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scnpilot_solids1_trim150_scaffold_2200_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2200_curated_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(475..666)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WFZ0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98381.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2200_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1793..2788
DNA (996bp) protein (332aa)
Integron integrase n=1 Tax=Rhodanobacter denitrificans RepID=M4NMS4_9GAMM
integron integrase
Integron integrase {ECO:0000313|EMBL:AGG90943.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2200_curated_3

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comp(2817..3848)
DNA (1032bp) protein (344aa)
Putative Cellobiose phosphorylase {ECO:0000313|EMBL:CBH95152.1}; EC=2.4.1.20 {ECO:0000313|EMBL:CBH95152.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative Cellobiose phosphorylase n=1 Tax=mine drainage metagenome RepID=E6PJQ1_9ZZZZ
putative glycosyl transferase
scnpilot_solids1_trim150_scaffold_2200_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3794..11542)
DNA (7749bp) protein (2583aa)
Cellobiose phosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NMQ6_9GAMM
cellobiose phosphorylase
Cellobiose phosphorylase {ECO:0000313|EMBL:AGG90923.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2200_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11596..12060
DNA (465bp) protein (155aa)
Acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NLI1_9GAMM
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGG90922.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2200_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12068..14539)
DNA (2472bp) protein (824aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NTX6_9GAMM
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG90921.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2200_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14637..15785)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ06_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90920.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2200_curated_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15900..17183
DNA (1284bp) protein (428aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EIL96987.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EIL96987.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Acetyl-CoA acetyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBZ6_9GAMM
acetyl-CoA acetyltransferase
scnpilot_solids1_trim150_scaffold_2200_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17236..17787
DNA (552bp) protein (184aa)
TonB family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMQ0_9GAMM
TonB family protein
TonB family protein {ECO:0000313|EMBL:AGG90918.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 9 items

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