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scnpilot_solids1_trim150_scaffold_1545_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1545_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1108
DNA (1107bp) protein (369aa)
DNA topoisomerase IV subunit A (EC:5.99.1.3)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DNA topoisomerase 4 subunit A n=1 Tax=Rhodanobacter denitrificans RepID=M4NIB2_9GAMM
scnpilot_solids1_trim150_scaffold_1545_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1212..1646
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYS6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89838.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1545_curated_3
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1851..2882)
DNA (1032bp) protein (344aa)
Helix-turn-helix domain-containing protein AraC type n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BUP8_NITHN
AraC family transcriptional regulator
Helix-turn-helix domain-containing protein AraC type {ECO:0000313|EMBL:ADE13448.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
scnpilot_solids1_trim150_scaffold_1545_curated_4
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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2996..3574
DNA (579bp) protein (193aa)
osmotically inducible protein C n=1 Tax=Thioalkalivibrio RepID=UPI00036DA1EE
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:ACL47884.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
scnpilot_solids1_trim150_scaffold_1545_curated_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3686..3901
DNA (216bp) protein (72aa)
Putative dinucleotide-binding enzyme n=1 Tax=Rhodanobacter denitrificans RepID=I4WYS4_9GAMM
putative dinucleotide-binding enzyme
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1545_curated_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3931..4221
DNA (291bp) protein (97aa)
Lipoate-protein ligase A n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU45_9GAMM
Lipoate-protein ligase A {ECO:0000313|EMBL:EIM02987.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1545_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4218..4994
DNA (777bp) protein (259aa)
Lipoate--protein ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYS1_9GAMM
lipoate-protein ligase A
Lipoate-protein ligase A {ECO:0000313|EMBL:AGG89843.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1545_curated_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5035..5523)
DNA (489bp) protein (163aa)
ADP-ribose pyrophosphatase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU43_9GAMM
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:EIM02985.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zn-finger containing NTP pyrophosphohydrolase
scnpilot_solids1_trim150_scaffold_1545_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5620..6444
DNA (825bp) protein (275aa)
Putative periplasmic protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFW7_9GAMM
putative periplasmic protein
Putative periplasmic protein {ECO:0000313|EMBL:AGG89845.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1545_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6441..8852
DNA (2412bp) protein (804aa)
Penicilin amidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NQG8_9GAMM
Penicilin amidase {ECO:0000313|EMBL:AGG89846.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
penicilin amidase
scnpilot_solids1_trim150_scaffold_1545_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9237..10313
DNA (1077bp) protein (359aa)
ApbE family lipoprotein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3I7_9GAMM
ApbE family lipoprotein {ECO:0000313|EMBL:EIL94028.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
membrane-associated lipoprotein involved in thiamine biosynthesis
scnpilot_solids1_trim150_scaffold_1545_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10313..12412
DNA (2100bp) protein (700aa)
Regulatory protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYR5_9GAMM
Regulator of nitric oxide reductase transcription {ECO:0000313|EMBL:AGG89849.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
regulator of nitric oxide reductase transcription
Displaying 12 items

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