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scnpilot_solids1_trim150_scaffold_703_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_703_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..462
DNA (462bp) protein (154aa)
Dihydroorotase n=1 Tax=Rhodanobacter denitrificans RepID=I4WVS4_9GAMM
N-acyl-D-aspartate/D-glutamate deacylase
N-acyl-D-aspartate/D-glutamate deacylase {ECO:0000313|EMBL:AGG90368.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_703_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1226..2050
DNA (825bp) protein (275aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Methylenetetrahydrofolate reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WVS5_9GAMM
scnpilot_solids1_trim150_scaffold_703_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2076..2645
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHD6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90370.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_703_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2699..3616
DNA (918bp) protein (306aa)
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched chain amino acid aminotransferase apoenzyme {ECO:0000313|EMBL:AGG90371.1}; EC=2.6.1.42 {ECO:0000313|EMBL:AGG90371.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Branched chain amino acid aminotransferase apoenzyme n=1 Tax=Rhodanobacter denitrificans RepID=I4WVS7_9GAMM
scnpilot_solids1_trim150_scaffold_703_curated_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3664..4947)
DNA (1284bp) protein (428aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS36_9GAMM
signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_703_curated_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4931..5617)
DNA (687bp) protein (229aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSY2_9GAMM
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EIM02574.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
scnpilot_solids1_trim150_scaffold_703_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5950..6870)
DNA (921bp) protein (307aa)
Probable alpha-L-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_01552}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_01552};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ribosomal protein S6 modification protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVT0_9GAMM
alpha-L-glutamate ligase, RimK family
scnpilot_solids1_trim150_scaffold_703_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6881..7333)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVT1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90375.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_703_curated_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7654..9867
DNA (2214bp) protein (738aa)
Fe2+-dicitrate sensor, membrane component n=1 Tax=Rhodanobacter denitrificans RepID=M4NJW0_9GAMM
Fe2+-dicitrate sensor, membrane component
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_703_curated_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9940..10641
DNA (702bp) protein (234aa)
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NL32_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_703_curated_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10855..12696
DNA (1842bp) protein (614aa)
Di-/tricarboxylate transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WVU0_9GAMM
Di-/tricarboxylate transporter {ECO:0000313|EMBL:AGG90380.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
di-/tricarboxylate transporter
scnpilot_solids1_trim150_scaffold_703_curated_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12798..14066
DNA (1269bp) protein (423aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSX5_9GAMM
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:EIM02567.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
nucleotide sugar dehydrogenase
scnpilot_solids1_trim150_scaffold_703_curated_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14023..14427)
DNA (405bp) protein (135aa)
Rieske (2Fe-2S) iron-sulfur domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSX4_9GAMM
Rieske (2Fe-2S) iron-sulfur domain-containing protein {ECO:0000313|EMBL:EIM02566.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
scnpilot_solids1_trim150_scaffold_703_curated_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14506..14781
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVU3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02565.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_703_curated_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14837..15763
DNA (927bp) protein (309aa)
DMT(Drug/metabolite transporter) superfamily permease n=2 Tax=Rhodanobacter denitrificans RepID=M4NHK4_9GAMM
DMT(drug/metabolite transporter) superfamily permease
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:AGG90384.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_703_curated_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15950..17362
DNA (1413bp) protein (471aa)
Short chain fatty acid transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WVU5_9GAMM
short chain fatty acids transporter
Short chain fatty acids transporter {ECO:0000313|EMBL:AGG90385.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_703_curated_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17423..18748)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSX0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02562.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type transport system, involved in lipoprotein release, permease component
scnpilot_solids1_trim150_scaffold_703_curated_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18761..19927)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSW9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02561.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type transport system, involved in lipoprotein release, permease component
scnpilot_solids1_trim150_scaffold_703_curated_19
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20112..20801)
DNA (690bp) protein (230aa)
ABC transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WVU8_9GAMM
ABC-type antimicrobial peptide transport system, ATPase component
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_703_curated_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20915..22150)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WT49_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02641.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RND family efflux transporter, MFP subunit
scnpilot_solids1_trim150_scaffold_703_curated_21
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22283..23062
DNA (780bp) protein (260aa)
2-keto-4-pentenoate hydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WT48_9GAMM
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_703_curated_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23157..23567
DNA (411bp) protein (137aa)
Large-conductance mechanosensitive channel n=1 Tax=Rhodanobacter denitrificans RepID=I4WVV1_9GAMM
large conductance mechanosensitive channel protein
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 22 items

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