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scnpilot_solids2_trim150_scaffold_1890_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1890_curated_1
Gordonia malaquae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..852)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Gordonia malaquae NBRC 108250 RepID=M3USY1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC78397.1}; TaxID=1223542 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia malaquae NBRC 108250.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1890_curated_2
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1256..2491)
DNA (1236bp) protein (412aa)
NLP/P60 protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCW5_NAKMY
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:ACV79568.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1890_curated_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2991..4775)
DNA (1785bp) protein (595aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-]
Apolipoprotein N-acyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAL8_NAKMY
Apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ACV79271.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1890_curated_4
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4985..5929)
DNA (945bp) protein (315aa)
peptidase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627D20
Uncharacterized protein {ECO:0000313|EMBL:AIG80434.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1890_curated_5
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5926..6288)
DNA (363bp) protein (121aa)
Transcriptional repressor, CopY family n=2 Tax=Saccharopolyspora erythraea RepID=A4F7D6_SACEN
CopY family transcriptional regulator; K07737 putative transcriptional regulator
Penicillinase repressor {ECO:0000313|EMBL:EQD83599.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
scnpilot_solids2_trim150_scaffold_1890_curated_6
Streptomyces sp. FR1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6516..7013)
DNA (498bp) protein (166aa)
UPI0003D93340 related cluster n=1 Tax=unknown RepID=UPI0003D93340
Putative integral membrane protein {ECO:0000313|EMBL:AHE38932.1}; TaxID=349971 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. FR1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1890_curated_7
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7099..8562
DNA (1464bp) protein (488aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X996_NAKMY
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ACV77164.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1890_curated_8
Corynebacterium glutamicum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8701..9075
DNA (375bp) protein (125aa)
ArsR family transcriptional regulator n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B6F5E4
putative transcriptional regulator, ArsR-family
Predicted transcriptional regulators {ECO:0000313|EMBL:BAC00176.1}; TaxID=196627 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /; LMG 3730 / NCIMB 10025).;"
scnpilot_solids2_trim150_scaffold_1890_curated_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9072..10169
DNA (1098bp) protein (366aa)
cobalt transporter n=1 Tax=Humibacter albus RepID=UPI0003B3DBBB
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ERK71129.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
cation diffusion facilitator family transporter
scnpilot_solids2_trim150_scaffold_1890_curated_10
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10159..10488
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KYB8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EKX65328.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1890_curated_11
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10637..11659)
DNA (1023bp) protein (341aa)
Sodium/calcium exchanger membrane protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LSK5_9ACTO
sodium/calcium exchanger membrane protein
Sodium/calcium exchanger membrane protein {ECO:0000313|EMBL:AGL19946.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
scnpilot_solids2_trim150_scaffold_1890_curated_12
unknown

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11935..12366
DNA (432bp) protein (144aa)

This feature has no annotations

Displaying 12 items

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