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scnpilot_solids2_trim150_scaffold_1023_curated

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1023_curated_1
Mesorhizobium sp. L103C105A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..772
DNA (771bp) protein (257aa)
UPI0003CFDD2C related cluster n=1 Tax=unknown RepID=UPI0003CFDD2C
Uncharacterized protein {ECO:0000313|EMBL:ESZ68744.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C105A0.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1023_curated_2
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(774..2117)
DNA (1344bp) protein (448aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
Two-component sensor protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988S4_RHILO
two-component sensor protein
scnpilot_solids2_trim150_scaffold_1023_curated_3
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2117..2782)
DNA (666bp) protein (222aa)
Two-component system, regulatory protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988S5_RHILO
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:ETA71275.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
two-component system, regulatory protein
scnpilot_solids2_trim150_scaffold_1023_curated_4
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2782..3108)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037A0A6A
Uncharacterized protein {ECO:0000313|EMBL:AID33573.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1023_curated_5
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3243..3788)
DNA (546bp) protein (182aa)
Cytochrome b561 n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98DL7_RHILO
cytochrome b561; K12262 cytochrome b561
Cytochrome B561 {ECO:0000313|EMBL:ESY67998.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
scnpilot_solids2_trim150_scaffold_1023_curated_6
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4238..4486)
DNA (249bp) protein (83aa)
Mlr4467 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E03_RHILO
hypothetical protein
Mlr4467 protein {ECO:0000313|EMBL:BAB51117.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_1023_curated_7
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4668..7319)
DNA (2652bp) protein (884aa)
ABC transporter integral membrane protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E04_RHILO
ABC transporter integral membrane protein {ECO:0000313|EMBL:BAB51116.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
ABC transporter; K02004 putative ABC transport system permease protein
scnpilot_solids2_trim150_scaffold_1023_curated_8
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7319..7996)
DNA (678bp) protein (226aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E05_RHILO
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:BAB51115.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_1023_curated_9
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7989..8651)
DNA (663bp) protein (221aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E06_RHILO
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAB51114.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_1023_curated_10
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8653..9246)
DNA (594bp) protein (198aa)
Putative lipoprotein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E07_RHILO
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:BAB51113.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_1023_curated_11
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9349..10722)
DNA (1374bp) protein (458aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
UPI0003CDD07F related cluster n=1 Tax=unknown RepID=UPI0003CDD07F
sensory histidine protein kinase
scnpilot_solids2_trim150_scaffold_1023_curated_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10709..11386)
DNA (678bp) protein (226aa)
Response regulator receiver n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8THQ8_MESCW
DNA-binding response regulator in two-component regulatory system with CusS {ECO:0000313|EMBL:CDX40357.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
response regulator receiver
scnpilot_solids2_trim150_scaffold_1023_curated_13
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11469..12287)
DNA (819bp) protein (273aa)
UPI0003CF72A5 related cluster n=2 Tax=unknown RepID=UPI0003CF72A5
Membrane protein {ECO:0000313|EMBL:ESX68906.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1023_curated_14
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12284..12541)
DNA (258bp) protein (86aa)
Mlr4455 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E11_RHILO
hypothetical protein
Mlr4455 protein {ECO:0000313|EMBL:BAB51109.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_1023_curated_15
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12968..13435)
DNA (468bp) protein (156aa)
Cytochrome B561 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0T6_9BRAD
Cytochrome B561 {ECO:0000313|EMBL:EFI53316.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
cybB2; cytochrome B561; K12262 cytochrome b561
scnpilot_solids2_trim150_scaffold_1023_curated_16
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13493..14056)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003760BDC
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:EJC69990.1}; Flags: Precursor;; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
protein tyrosine/serine phosphatase
scnpilot_solids2_trim150_scaffold_1023_curated_17

Not on your lists

14285..14899
DNA (615bp) protein (205aa)
Nickel-cobalt-cadmium resistance protein n=1 Tax=Brucella sp. BO2 RepID=E2PQZ7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKN87129.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
isoprenylcysteine carboxyl methyltransferase
scnpilot_solids2_trim150_scaffold_1023_curated_18
unknown

Not on your lists

comp(15323..15436)
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1023_curated_19
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15442..15873)
DNA (432bp) protein (144aa)
camphor resistance protein CrcB n=1 Tax=Roseomonas sp. B5 RepID=UPI000308763E
CrcB protein; K06199 CrcB protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
scnpilot_solids2_trim150_scaffold_1023_curated_20
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16402..16809
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UDD0_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:KKC31838.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
propeptide PepSY amd peptidase M4
scnpilot_solids2_trim150_scaffold_1023_curated_21
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17001..17543
DNA (543bp) protein (181aa)
ChrB domain-containing protein n=1 Tax=Afipia birgiae RepID=UPI000371F7F5
PaaX-like protein {ECO:0000313|EMBL:EJB03369.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
ChrB domain-containing protein
scnpilot_solids2_trim150_scaffold_1023_curated_22
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17545..18786
DNA (1242bp) protein (414aa)
Major facilitator superfamily protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B0C7_9RHIZ
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:AGK56899.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_1023_curated_23
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18862..19413
DNA (552bp) protein (184aa)
PAP2 superfamily protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9X3T5_RHILT
PA-phosphatase-like phosphoesterase
PAP2 superfamily protein {ECO:0000313|EMBL:EJB03371.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
scnpilot_solids2_trim150_scaffold_1023_curated_24
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19423..21450
DNA (2028bp) protein (676aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031FF2A6
Putative membrane-associated protein {ECO:0000313|EMBL:EJB03372.1}; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
PA-phosphatase-like phosphoesterase
scnpilot_solids2_trim150_scaffold_1023_curated_25
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21483..21920)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUQ6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFB09583.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1023_curated_26
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21928..23238)
DNA (1311bp) protein (437aa)
NreB protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5K2Z8_9RHIZ
NreB protein {ECO:0000313|EMBL:ELT51239.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
Permease, MFS
scnpilot_solids2_trim150_scaffold_1023_curated_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23238..23513)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUQ8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55548.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein; K07807 hypothetical protein NreA
scnpilot_solids2_trim150_scaffold_1023_curated_28
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24014..24748
DNA (735bp) protein (245aa)
Plasmid pTOM9 ORF1-like protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5K5P7_9RHIZ
Membrane protein {ECO:0000313|EMBL:EXL02821.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1023_curated_29
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24760..25524
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JSV6_9RHIZ
Membrane protein {ECO:0000313|EMBL:EZQ13306.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1023_curated_30
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26282..26653
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F718_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV11943.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
Displaying items 1-30 of 43 in total

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