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scnpilot_solids2_trim150_scaffold_1543_curated

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1543_curated_1
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..114
DNA (114bp) protein (38aa)
ahpC; alkyl hydroperoxide reductase; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
Peroxiredoxin n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMG4_9GAMM
NODE_50, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96956.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
scnpilot_solids2_trim150_scaffold_1543_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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298..1908
DNA (1611bp) protein (537aa)
Alkyl hydroperoxide reductase subunit F n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW51_9GAMM
Alkyl hydroperoxide reductase subunit F {ECO:0000313|EMBL:EIL91442.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
alkyl hydroperoxide reductase, F subunit
scnpilot_solids2_trim150_scaffold_1543_curated_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2197..3024
DNA (828bp) protein (276aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01967}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01967};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01967}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NAD-dependent protein deacetylase n=1 Tax=Rhodanobacter thiooxydans LCS2 PF3_9GAMM">RepID=I4WPF3_9GAMM
NAD-dependent protein deacetylase, SIR2 family
scnpilot_solids2_trim150_scaffold_1543_curated_4
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3106..3564
DNA (459bp) protein (153aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
methionine-R-sulfoxide reductase (EC:1.8.4.11); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
methionine sulfoxide reductase B n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003797377
scnpilot_solids2_trim150_scaffold_1543_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3561..4088
DNA (528bp) protein (176aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWL8_9GAMM
methionine-S-sulfoxide reductase
scnpilot_solids2_trim150_scaffold_1543_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4100..5263)
DNA (1164bp) protein (388aa)
Lipase class 3 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4R8_9GAMM
Lipase class 3 {ECO:0000313|EMBL:EIL94459.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative lipase family protein
scnpilot_solids2_trim150_scaffold_1543_curated_7
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5307..5825)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Burkholderia thailandensis MSMB121 RepID=N0ANQ3_BURTH
hypothetical protein
KY49.ctg7180000000014_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIP17851.1}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
scnpilot_solids2_trim150_scaffold_1543_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5917..6135)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WRA7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89324.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1543_curated_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6270..6626
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0U6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93087.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1543_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6747..7610
DNA (864bp) protein (288aa)
PAS/PAC sensor-containing diguanylate cyclase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWC9_9GAMM
PAS/PAC sensor-containing diguanylate cyclase {ECO:0000313|EMBL:EIL91520.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PAS/PAC sensor-containing diguanylate cyclase
scnpilot_solids2_trim150_scaffold_1543_curated_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7705..8184
DNA (480bp) protein (160aa)
3-demethylubiquinone-9 3-methyltransferase; K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTF2_9GAMM
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:EIL90493.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_1543_curated_12
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8407..9201
DNA (795bp) protein (265aa)
putative exodeoxyribonuclease III protein (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Putative EXODEOXYRIBONUCLEASE III PROTEIN n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FT02_STRMK
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids2_trim150_scaffold_1543_curated_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9223..9630)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WJH7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99618.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glyoxalase
scnpilot_solids2_trim150_scaffold_1543_curated_14
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9808..12123)
DNA (2316bp) protein (772aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003467C2E
Uncharacterized protein {ECO:0000313|EMBL:KGM57077.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
transcriptional regulator domain-containing protein
scnpilot_solids2_trim150_scaffold_1543_curated_15
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12349..12879
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B1B6B
Uncharacterized protein {ECO:0000313|EMBL:EXI78230.1}; Flags: Precursor;; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
scnpilot_solids2_trim150_scaffold_1543_curated_16
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13048..13878)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0I0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92971.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_1543_curated_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14200..15423
DNA (1224bp) protein (408aa)
Glucose sorbosone dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTG7_9GAMM
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:EIL90508.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glucose sorbosone dehydrogenase
scnpilot_solids2_trim150_scaffold_1543_curated_18
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15485..15820)
DNA (336bp) protein (112aa)
acetyltransferase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI00039FDDBB
acetyltransferase; K06975
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids2_trim150_scaffold_1543_curated_19
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16159..17001
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PAF5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX61395.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
scnpilot_solids2_trim150_scaffold_1543_curated_20
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17090..18205
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WS53_9GAMM
Lipoprotein {ECO:0000313|EMBL:KGM57806.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
lipoprotein
scnpilot_solids2_trim150_scaffold_1543_curated_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18248..18988
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWI2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91573.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
Displaying 21 items

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