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scnpilot_solids2_trim150_scaffold_1289_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1289_curated_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..897
DNA (897bp) protein (299aa)
Ribonucleoside-diphosphate reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJW2_9GAMM
ribonucleoside-diphosphate reductase, alpha subunit
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1289_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1005..1301)
DNA (297bp) protein (99aa)
Excinuclease ABC subunit C n=1 Tax=Rhodanobacter denitrificans RepID=I4WJW1_9GAMM
putative endonuclease containing a URI domain
Putative endonuclease containing a URI domain {ECO:0000313|EMBL:AGG90670.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1289_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1449..2474
DNA (1026bp) protein (342aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W795_9GAMM
ribonucleotide reductase, beta subunit
scnpilot_solids2_trim150_scaffold_1289_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2651..3037
DNA (387bp) protein (129aa)
Methicillin resistance protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W798_9GAMM
Methicillin resistance protein {ECO:0000313|EMBL:EIL95339.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_1289_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3039..4955
DNA (1917bp) protein (639aa)
Antirepressor regulating drug resistance protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIE7_9GAMM
antirepressor regulating drug resistance protein
Antirepressor regulating drug resistance protein {ECO:0000313|EMBL:AGG90674.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1289_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5041..8133)
DNA (3093bp) protein (1031aa)
Helicase, type I site-specific restriction-modification system restriction subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NFB0_9GAMM
helicase, type I site-specific restriction-modification system restriction subunit
Helicase, type I site-specific restriction-modification system restriction subunit {ECO:0000313|EMBL:AGG88717.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1289_curated_7

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comp(8133..9380)
DNA (1248bp) protein (416aa)
ATPase, AAA+ superfamily n=2 Tax=mine drainage metagenome RepID=T1AEC4_9ZZZZ
ATPase, AAA+ superfamily {ECO:0000313|EMBL:EQD40245.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
AAA ATPase
scnpilot_solids2_trim150_scaffold_1289_curated_8
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9499..10788)
DNA (1290bp) protein (430aa)
Restriction modification system DNA specificity subunit n=1 Tax=Thauera aminoaromatica S2 RepID=N6YYE9_9RHOO
Restriction modification system DNA specificity subunit {ECO:0000313|EMBL:ENO87183.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
restriction endonuclease S subunit
scnpilot_solids2_trim150_scaffold_1289_curated_9
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10785..11885)
DNA (1101bp) protein (367aa)
Virulence protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GY17_METFK
virulence protein
Virulence protein {ECO:0000313|EMBL:ABE50870.1}; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
scnpilot_solids2_trim150_scaffold_1289_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11955..14156)
DNA (2202bp) protein (734aa)
Type I restriction-modification system methyltransferase subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NDC5_9GAMM
type I restriction-modification system methyltransferase subunit
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:AGG88714.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1289_curated_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14280..16616)
DNA (2337bp) protein (779aa)
Dipeptidyl peptidase IV n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR97_9GAMM
Dipeptidyl peptidase IV {ECO:0000313|EMBL:EIL89738.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
scnpilot_solids2_trim150_scaffold_1289_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16842..17747)
DNA (906bp) protein (302aa)
Transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NKR6_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG90677.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1289_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17847..18836
DNA (990bp) protein (330aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLY3_9GAMM
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:AGG90678.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1289_curated_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18903..19736
DNA (834bp) protein (278aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00817}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00817}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" s
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF04_9GAMM
7-cyano-7-deazaguanine reductase
scnpilot_solids2_trim150_scaffold_1289_curated_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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19866..20450
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NIA4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90680.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1289_curated_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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20555..23191
DNA (2637bp) protein (879aa)
Peptidase S41 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BJ0_SOLUE
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:ABJ81576.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Displaying 16 items

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