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scnpilot_solids2_trim150_scaffold_3407_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3407_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..2074
DNA (2073bp) protein (691aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Lon protease n=1 Tax=Rhodanobacter denitrificans RepID=I4WR60_9GAMM
ATP-dependent proteinase
scnpilot_solids2_trim150_scaffold_3407_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2412..2684
DNA (273bp) protein (91aa)
Bacterial nucleoid DNA-binding protein n=3 Tax=Rhodanobacter RepID=I4WR61_9GAMM
bacterial nucleoid DNA-binding protein
Nucleoid DNA-binding protein {ECO:0000313|EMBL:EIM01386.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_3407_curated_3
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2716..2946)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QAJ6_9ZZZZ
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
scnpilot_solids2_trim150_scaffold_3407_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3009..4919
DNA (1911bp) protein (637aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Parvulin-like peptidyl-prolyl isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WR62_9GAMM
parvulin-like peptidyl-prolyl isomerase
scnpilot_solids2_trim150_scaffold_3407_curated_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5046..6224)
DNA (1179bp) protein (393aa)
Membrane-bound lytic murein transglycosylase D n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJX4_9GAMM
Membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:EIL87515.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
LysM repeat-containing protein
scnpilot_solids2_trim150_scaffold_3407_curated_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6221..6985)
DNA (765bp) protein (255aa)
Hydroxyacylglutathione hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPJ7_9GAMM
hydroxyacylglutathione hydrolase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3407_curated_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7224..7943
DNA (720bp) protein (240aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPJ8_9GAMM
methylase involved in ubiquinone/menaquinone biosynthesis
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3407_curated_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7936..8379
DNA (444bp) protein (148aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Ribonuclease H n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPJ9_9GAMM
ribonuclease HI
scnpilot_solids2_trim150_scaffold_3407_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8376..9080
DNA (705bp) protein (235aa)
DNA polymerase III, epsilon subunit (EC:2.7.7.7)
DNA polymerase III subunit epsilon n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6N7_9GAMM
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EIL95128.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_3407_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9100..9801)
DNA (702bp) protein (234aa)
Protein phosphatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WR68_9GAMM
serine/threonine protein phosphatase
Serine/threonine protein phosphatase {ECO:0000313|EMBL:AGG89360.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3407_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10348..12720)
DNA (2373bp) protein (791aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6P1_9GAMM
scnpilot_solids2_trim150_scaffold_3407_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12944..13759
DNA (816bp) protein (272aa)
Putative phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00213394}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Short=PSRP {ECO:0000256|HAMAP-Rule:MF_01062};; EC=2.7.11.33 {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00160002};; EC=2.7.4.28 {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00159999};; Pyruvate, water dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; TaxID=1163407 species="Bacteri
Putative phosphoenolpyruvate synthase regulatory protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6P2_9GAMM
hypothetical protein
scnpilot_solids2_trim150_scaffold_3407_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13785..14186
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR71_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89357.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 13 items

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