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SCN18_14_9_16_R1_B_scaffold_12

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Displaying items 1-30 of 358 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_12_1
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(254..1054)
DNA (801bp) protein (267aa)
Putative toxin-antitoxin system, toxin component n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8V6_9FLAO
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:EFK35867.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_12_2
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1041..1391)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8V5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK35866.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
SCN18_14_9_16_R1_B_scaffold_12_3
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1378..2073)
DNA (696bp) protein (232aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8V4_9FLAO
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EFK35865.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
SCN18_14_9_16_R1_B_scaffold_12_4
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2240..2416
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8V3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK35864.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_12_5
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2680..3666
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8V2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK35863.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_12_6
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3675..4184
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8V1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK35862.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_12_7
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4187..5071
DNA (885bp) protein (295aa)
ftsH4; ATP-dependent zinc metalloprotease FtsH 4 (EC:3.4.24.-)
ATPase, AAA family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8V0_9FLAO
ATPase, AAA family {ECO:0000313|EMBL:EFK35861.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
SCN18_14_9_16_R1_B_scaffold_12_8
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5068..5883
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8U9_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJW62962.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
SCN18_14_9_16_R1_B_scaffold_12_9
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5994..6563
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S3M8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU18995.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
SCN18_14_9_16_R1_B_scaffold_12_10
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6566..7153
DNA (588bp) protein (196aa)
SCN18_14_9_16_R1_B_scaffold_12_11
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7201..8487
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9GAP9_9BACL
Uncharacterized protein {ECO:0000313|EMBL:GAE06892.1}; TaxID=1236974 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. JCM 10914.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_12_12
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8874..9560
DNA (687bp) protein (229aa)
Transposase, IS1 family n=1 Tax=Flavobacterium sp. CF136 RepID=J3C5A3_9FLAO
Transposase {ECO:0000313|EMBL:KIA91797.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
IS1 transposase
SCN18_14_9_16_R1_B_scaffold_12_13
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9655..11115)
DNA (1461bp) protein (487aa)
Fic family protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J541_9FLAO
Cell filamentation protein Fic {ECO:0000313|EMBL:KFC58149.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Fic family protein
SCN18_14_9_16_R1_B_scaffold_12_14
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12139..13941
DNA (1803bp) protein (601aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FSZ8_9SPHI
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_12_15
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13945..14592
DNA (648bp) protein (216aa)
Two component transcriptional regulator, LuxR family id=4445001 bin=GWF2_Melioribacter_38_21 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
LuxR family two component transcriptional regulator
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
SCN18_14_9_16_R1_B_scaffold_12_16
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14609..15742
DNA (1134bp) protein (378aa)
Beta-lactamase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QJ80_SPILD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ADB38793.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCN18_14_9_16_R1_B_scaffold_12_17
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15894..16931
DNA (1038bp) protein (346aa)
peptidase S41 protein, partial n=1 Tax=Pedobacter agri RepID=UPI00029A903A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII53857.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
SCN18_14_9_16_R1_B_scaffold_12_18
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17032..17199
DNA (168bp) protein (56aa)
SCN18_14_9_16_R1_B_scaffold_12_19
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17310..18161
DNA (852bp) protein (284aa)
Uncharacterized protein {ECO:0000313|EMBL:AHM62683.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
SCN18_14_9_16_R1_B_scaffold_12_20
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18250..19485
DNA (1236bp) protein (412aa)
Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C1G1_9FLAO
hypothetical protein
Tax=CG_Bacteroid_01
SCN18_14_9_16_R1_B_scaffold_12_21
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19563..20927
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I949_FLUTR
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
SCN18_14_9_16_R1_B_scaffold_12_22
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21089..23167
DNA (2079bp) protein (693aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T379_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL72492.1}; Flags: Precursor;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
uncharacterized protein
SCN18_14_9_16_R1_B_scaffold_12_23
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23201..24178
DNA (978bp) protein (326aa)
Internalin-like protein n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VVC6_9FLAO
Internalin-like protein {ECO:0000313|EMBL:EPR74190.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella psychrotolerans RS-3.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_12_24
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24245..24391)
DNA (147bp) protein (49aa)
SCN18_14_9_16_R1_B_scaffold_12_25
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24530..26608
DNA (2079bp) protein (693aa)
Uncharacterized protein n=2 Tax=Elizabethkingia anophelis RepID=L8K194_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJW62211.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
SCN18_14_9_16_R1_B_scaffold_12_26
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26644..26994
DNA (351bp) protein (117aa)
Tetracycline resistance element mobilization regulatory protein rteC n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FSS4_9FLAO
Tetracycline resistance element mobilization regulatory protein rteC {ECO:0000313|EMBL:EIA08633.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_12_27
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27518..28924)
DNA (1407bp) protein (469aa)
Aspartate ammonia-lyase {ECO:0000256|RuleBase:RU362017}; Short=Aspartase {ECO:0000256|RuleBase:RU362017};; EC=4.3.1.1 {ECO:0000256|RuleBase:RU362017};; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga cynodegmi.;"
aspartate ammonia-lyase (EC:4.3.1.1)
aspartate ammonia-lyase n=1 Tax=Capnocytophaga cynodegmi RepID=UPI0003696A77
SCN18_14_9_16_R1_B_scaffold_12_28
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28948..30126)
DNA (1179bp) protein (393aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4C4_FLAB3
Porin {ECO:0000313|EMBL:KIA88670.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_12_29
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30141..31475)
DNA (1335bp) protein (445aa)
C4-dicarboxylate ABC transporter n=1 Tax=Capnocytophaga cynodegmi RepID=UPI000381F018
Anaerobic C4-dicarboxylate transporter DcuB {ECO:0000313|EMBL:CEN37277.1}; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga cynodegmi.;"
anaerobic c4-dicarboxylate antiporter
SCN18_14_9_16_R1_B_scaffold_12_30
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31615..32256
DNA (642bp) protein (214aa)
cAMP regulatory protein n=1 Tax=Capnocytophaga canimorsus (strain 5) RepID=F9YRB7_CAPCC
cAMP regulatory protein
cAMP regulatory protein {ECO:0000313|EMBL:AEK22475.1}; TaxID=860228 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus (strain 5).;"
Displaying items 1-30 of 358 in total

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