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SCN18_14_9_16_R1_B_scaffold_3128

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3128_1
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3..86)
DNA (84bp) protein (28aa)
SCN18_14_9_16_R1_B_scaffold_3128_2
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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179..592
DNA (414bp) protein (138aa)
two component system sensor histidine kinase (EC:2.7.13.3)
Two-component system sensor histidine kinase {ECO:0000313|EMBL:CCB68810.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCB68810.1};; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
Two-component system sensor histidine kinase n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z641_FLABF
SCN18_14_9_16_R1_B_scaffold_3128_3
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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683..1423
DNA (741bp) protein (247aa)
Two-component system response regulatory protein, LytTR family n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z640_FLABF
LytTR family two component system response regulatory protein
Two-component system response regulatory protein, LytTR family {ECO:0000313|EMBL:CCB68809.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
SCN18_14_9_16_R1_B_scaffold_3128_4
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1477..2478
DNA (1002bp) protein (334aa)
Transcriptional regulator, AraC family n=4 Tax=Thermotoga RepID=B9K9W5_THENN
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACM23748.1}; TaxID=309803 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E).;"
SCN18_14_9_16_R1_B_scaffold_3128_5
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2552..4318
DNA (1767bp) protein (589aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y6F3_9SPHI
uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:BAP31489.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
SCN18_14_9_16_R1_B_scaffold_3128_6
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4392..6203
DNA (1812bp) protein (604aa)
hypothetical protein id=24442036 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
penicillin-binding protein
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
SCN18_14_9_16_R1_B_scaffold_3128_7
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6381..7943
DNA (1563bp) protein (521aa)
Beta-lactamase peptidase family S12 n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMR5_FLAJ1
Beta-lactamase {ECO:0000313|EMBL:KFF26576.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
beta-lactamase
SCN18_14_9_16_R1_B_scaffold_3128_8
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8664..9044)
DNA (381bp) protein (127aa)
IS3 family transposase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SLG8_9FLAO
IS3 family transposase {ECO:0000313|EMBL:ESU25230.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
integrase
SCN18_14_9_16_R1_B_scaffold_3128_9
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9111..9431)
DNA (321bp) protein (107aa)
DNA-binding protein n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI0002558E89
Uncharacterized protein {ECO:0000313|EMBL:ESU25229.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
helix-turn-helix, Psq domain protein
Displaying 9 items

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