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SCN18_14_9_16_R2_B_scaffold_108

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Displaying items 1-30 of 195 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R2_B_scaffold_108_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..815)
DNA (813bp) protein (271aa)
Gluconolactonase {ECO:0000313|EMBL:ABE33846.1}; EC=3.1.1.17 {ECO:0000313|EMBL:ABE33846.1};; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
Gluconolactonase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13PZ3_BURXL
NHL repeat family protein
SCN18_14_9_16_R2_B_scaffold_108_2
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(958..1833)
DNA (876bp) protein (292aa)
Beta-lactamase domain protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TM27_9BRAD
Beta-lactamase domain protein {ECO:0000313|EMBL:CCE07515.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
beta-lactamase
SCN18_14_9_16_R2_B_scaffold_108_3
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1850..2962)
DNA (1113bp) protein (371aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
alcohol dehydrogenase n=1 Tax=Leeia oryzae RepID=UPI0003797340
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
SCN18_14_9_16_R2_B_scaffold_108_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3015..3995)
DNA (981bp) protein (327aa)
2-nitropropane dioxygenase n=1 Tax=Pseudomonas monteilii RepID=UPI00031965ED
2-nitropropane dioxygenase {ECO:0000313|EMBL:KCZ86045.1}; TaxID=1280949 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas adhaerens MHS-3.;"
2-nitropropane dioxygenase
SCN18_14_9_16_R2_B_scaffold_108_5
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3995..5122)
DNA (1128bp) protein (376aa)
frc; formyl-coenzyme A transferase Frc (EC:2.8.3.16)
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Rhizobium sp. CF080 RepID=J2I2P6_9RHIZ
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EUB98153.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
SCN18_14_9_16_R2_B_scaffold_108_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5119..6213)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NCH2_9ACTO
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6296..7507
DNA (1212bp) protein (404aa)
Coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases n=1 Tax=uncultured alpha proteobacterium HF0130_20P23 RepID=E0XTA1_9PROT
limonene 1,2-monooxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_8
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7602..8417)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000318AD73
beta-lactamase-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8539..9711
DNA (1173bp) protein (391aa)
Acetyl-CoA acetyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5P5_ALIDK
acetyl-CoA acetyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_10
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9716..10111
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5P4_ALIDK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10108..11475)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002E37890
putative 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_12
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11454..13790)
DNA (2337bp) protein (779aa)
Carbon monoxide dehydrogenase large chain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TK46_9PROT
aldehyde oxidase/xanthine dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_13
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13872..15569
DNA (1698bp) protein (566aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI00036255A7
5-oxoprolinase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15566..16105
DNA (540bp) protein (180aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16111..17130
DNA (1020bp) protein (340aa)
asparaginase (EC:3.5.1.1)
Asparaginase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TME0_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17195..17554
DNA (360bp) protein (120aa)
Putative uncharacterized protein id=5007753 bin=GWA2_Deltaproteo_65_63 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
SCN18_14_9_16_R2_B_scaffold_108_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17564..17932)
DNA (369bp) protein (123aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18075..18869
DNA (795bp) protein (265aa)
Alpha/beta hydrolase fold protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JTQ9_9PROT
alpha/beta hydrolase fold protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_19
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18871..20052
DNA (1182bp) protein (394aa)
Peptidase M20D, amidohydrolase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IPU7_9PROT
amidohydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20076..20741
DNA (666bp) protein (222aa)
DSBA oxidoreductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036C9652
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_21
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20701..21561)
DNA (861bp) protein (287aa)
Transcriptional regulator, LysR family n=3 Tax=Burkholderia cenocepacia RepID=A0AZV2_BURCH
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:KGY54326.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
SCN18_14_9_16_R2_B_scaffold_108_22
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21655..22041
DNA (387bp) protein (129aa)
Methionine-gamma-lyase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IGS9_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig167, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51029.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
4-oxalocrotonate tautomerase
SCN18_14_9_16_R2_B_scaffold_108_23
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22080..22463)
DNA (384bp) protein (128aa)
Cold-shock DNA-binding domain protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IF06_BEII9
cold-shock DNA-binding domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_24
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22523..22771)
DNA (249bp) protein (83aa)
Type 1 capsular polysaccharide biosynthesis protein J n=1 Tax=Oceanibaculum indicum P24 RepID=K2JNQ0_9PROT
type 1 capsular polysaccharide biosynthesis protein J
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_25
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22863..23342
DNA (480bp) protein (160aa)
Transcriptional regulator, AsnC family n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TLR2_9RHIZ
transcriptional regulator, AsnC family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_108_26
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23463..24461
DNA (999bp) protein (333aa)
phosphoglycerate dehydrogenase (EC:1.1.1.95)
Putative phosphoglycerate dehydrogenase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJ64_9BRAD
3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ETR77596.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCN18_14_9_16_R2_B_scaffold_108_27
unknown

Not on your lists

comp(24587..24748)
DNA (162bp) protein (54aa)
SCN18_14_9_16_R2_B_scaffold_108_28
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

24853..25833
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002ED046E
aldo/keto reductase family oxidoreductase
Tax=RBG_16_Chloroflexi_56_8_curated
SCN18_14_9_16_R2_B_scaffold_108_29
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25806..27077)
DNA (1272bp) protein (424aa)
Putative membrane transport protein n=3 Tax=Bordetella bronchiseptica RepID=K0MY59_BORBM
membrane transport protein
Transporter, major facilitator family protein {ECO:0000313|EMBL:KDD57371.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
SCN18_14_9_16_R2_B_scaffold_108_30
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27165..28034
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036C00AC
Uncharacterized protein {ECO:0000313|EMBL:KAK45377.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
gluconolactanase
Displaying items 1-30 of 195 in total

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