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SCN18_14_9_16_R2_B_scaffold_113

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Displaying items 1-30 of 184 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R2_B_scaffold_113_1
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..450
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003626CE2
peptidase M23B
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(530..3136)
DNA (2607bp) protein (869aa)
ATP-dependent chaperone n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AT38_AZOBR
clpB2; ATP-dependent chaperone
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3611..4216)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=uncultured alpha proteobacterium HF0010_30A23 RepID=E0XRL5_9PROT
Putative cytosolic protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_4
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4397..5215)
DNA (819bp) protein (273aa)
Release factor glutamine methyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMA3_9RHIZ
HemK family modification methylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_5
SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, Bacteria

Not on your lists

comp(5257..6321)
DNA (1065bp) protein (355aa)
Peptide chain release factor 1 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AT31_AZOBR
peptide chain release factor 1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_6
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6325..7566)
DNA (1242bp) protein (414aa)
hisS; Histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TN84_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_7
SCNPILOT_EXPT_1000_BF_Rhodospirillales_43_39, SCNPILOT_EXPT_1000_BF_Rhodospirillales_43_39, SCNPILOT_EXPT_1000_BF_Rhodospirillales_43_39, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7613..8761)
DNA (1149bp) protein (383aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TN85_9PROT
SCN18_14_9_16_R2_B_scaffold_113_8
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8846..9838)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z245_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_9
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9919..12150)
DNA (2232bp) protein (744aa)
Signal transduction protein containing GAF and PtsI domains n=1 Tax=Oceanibaculum indicum P24 RepID=K2K412_9PROT
signal transduction protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_10
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12403..13650)
DNA (1248bp) protein (416aa)
Aspartokinase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AT24_AZOBR
aspartate kinase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13709..14470
DNA (762bp) protein (254aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B55A7B
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
ubiG; 3-demethylubiquinone-9 3-O-methyltransferase
SCN18_14_9_16_R2_B_scaffold_113_12
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14542..15372
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q137A4_RHOPS
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_13
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15376..15849)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003673934
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_14
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15966..16835)
DNA (870bp) protein (290aa)
Bifunctional nitrilase/cyanide hydratase/apolipoprotein N-acyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J1H9_9PROT
putative nitrilase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_15
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16848..17108)
DNA (261bp) protein (87aa)
glutaredoxin n=1 Tax=Sphingobium xenophagum RepID=UPI0002EB2FAD
grxC; glutaredoxin-3
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_16
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17128..17532)
DNA (405bp) protein (135aa)
Competence protein F n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUV4_RHOCS
competence protein ComF
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_17
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17870..18868
DNA (999bp) protein (333aa)
SAM-dependent methyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K5Z7_9PROT
SAM-dependent methyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18871..19686
DNA (816bp) protein (272aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_19
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19683..19997)
DNA (315bp) protein (105aa)
Hydrolase, NUDIX family, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUV6_RHOCS
hydrolase
NTP pyrophosphohydrolase {ECO:0000313|EMBL:KJZ19371.1}; TaxID=579483 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella sp. S4079.;"
SCN18_14_9_16_R2_B_scaffold_113_20
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20132..21370)
DNA (1239bp) protein (413aa)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4L2_9PROT
N-acetylglutamate synthase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21452..22423)
DNA (972bp) protein (324aa)
Parvulin-like peptidyl-prolyl isomerase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NXS1_AZOS1
parvulin-like peptidyl-prolyl isomerase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_22
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22689..25445
DNA (2757bp) protein (919aa)
Preprotein translocase secA subunit n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6U2_9PROT
secA; Preprotein translocase secA subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_23
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25489..26208
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YJZ4_LYNSP
Uncharacterized protein {ECO:0000313|EMBL:EAW38825.1}; TaxID=313612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106) (Lyngbya aestuarii (strain CCY9616)).;"
hypothetical protein
SCN18_14_9_16_R2_B_scaffold_113_24
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26337..28517
DNA (2181bp) protein (727aa)
TonB dependent receptor n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSE7_GRABC
TonB dependent receptor
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_25
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28550..29323
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RPT5_9PROT
protein tyrosine/serine phosphatase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_26
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29342..30583
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI0003754D85
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_27
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30580..31440)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HQ43_9BRAD
h16_A2424; hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_28
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31485..31988
DNA (504bp) protein (168aa)
GNAT family acetyltransferase 6 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T4E3_ALCXX
GCN5-related N-acetyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_29
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31995..32891)
DNA (897bp) protein (299aa)
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase n=1 Tax=Marinobacter algicola DG893 RepID=A6F0R1_9ALTE
alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_113_30
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32989..34734
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H0T8_9BRAD
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
Displaying items 1-30 of 184 in total

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