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SCN18_14_9_16_R2_B_scaffold_987

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R2_B_scaffold_987_1
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..591
DNA (591bp) protein (197aa)
Actin-like ATPase involved in cell morphogenesis n=2 Tax=Magnetospirillum RepID=Q2W1F8_MAGSA
rod shape-determining protein MreB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_987_2
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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635..1519
DNA (885bp) protein (295aa)
Cell shape-determining protein MreC n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FX96_PHAMO
mreC; Cell shape-determining protein MreC
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_987_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1521..2093
DNA (573bp) protein (191aa)
Cell shape determining protein MreD n=1 Tax=Oceanibaculum indicum P24 RepID=K2K918_9PROT
mreD; Cell shape-determining protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_987_4
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2090..4021
DNA (1932bp) protein (644aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00035F6804
mrdA; penicillin binding protein 2
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_987_5
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4018..5154
DNA (1137bp) protein (379aa)
Cell wall shape-determining protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZJ7_9PROT
mrdB; cell wall shape-determining protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_987_trna_1
unknown

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5343..5415
DNA (73bp)
transferRNA Lys
SCN18_14_9_16_R2_B_scaffold_987_6
unknown

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6391..7011
DNA (621bp) protein (207aa)

This feature has no annotations

SCN18_14_9_16_R2_B_scaffold_987_7
unknown

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7312..7686
DNA (375bp) protein (125aa)

This feature has no annotations

SCN18_14_9_16_R2_B_scaffold_987_8
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8219..9217)
DNA (999bp) protein (333aa)
Outer membrane protein A (3aII*Gd) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F935_9PROT
ompA; outer membrane protein A (3a;II*;G;d)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_987_9
unknown

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comp(9400..9717)
DNA (318bp) protein (106aa)

This feature has no annotations

SCN18_14_9_16_R2_B_scaffold_987_10
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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10369..10929
DNA (561bp) protein (187aa)
Putative DNA polymerase beta family protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXL3_9BRAD
Putative DNA polymerase beta family protein {ECO:0000313|EMBL:EAQ35277.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
DNA polymerase beta family protein
SCN18_14_9_16_R2_B_scaffold_987_11
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11562..12722)
DNA (1161bp) protein (387aa)
Glycosyl transferase, group 1 n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQS4_NITWN
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABA05367.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCN18_14_9_16_R2_B_scaffold_987_12
unknown

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13016..13111
DNA (96bp) protein (32aa)

This feature has no annotations

SCN18_14_9_16_R2_B_scaffold_987_13
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13618..14157
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IXG5_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ00989.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCN18_14_9_16_R2_B_scaffold_987_14
unknown

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15114..15224
DNA (111bp) protein (37aa)

This feature has no annotations

SCN18_14_9_16_R2_B_scaffold_987_15
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15700..16014)
DNA (315bp) protein (105aa)
plasmid stabilization protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037A96EE
Plasmid stabilization protein {ECO:0000313|EMBL:KGM33141.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
plasmid stabilization system protein
SCN18_14_9_16_R2_B_scaffold_987_16
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16131..16346)
DNA (216bp) protein (72aa)
ATP-dependent DNA ligase protein (EC:6.5.1.1)
UPI0003CF059E related cluster n=1 Tax=unknown RepID=UPI0003CF059E
Uncharacterized protein {ECO:0000313|EMBL:ESY66367.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCN18_14_9_16_R2_B_scaffold_987_17
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16481..16663
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00035D341F
two-component hybrid sensor and regulator
PAS domain S-box {ECO:0000313|EMBL:EJK78680.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
Displaying 18 items

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