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SCN18_14_9_16_R2_B_scaffold_900_5

Organism: SCN18_14_9_16_R2_B_Alphaproteobacteria_64_15

near complete RP 39 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2688..3383

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=RL1_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 224.0
  • Bit_score: 353
  • Evalue 1.40e-94
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 224.0
  • Bit_score: 353
  • Evalue 3.90e-95
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 224.0
  • Bit_score: 353
  • Evalue 1.90e-94

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Taxonomy

Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120 → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGCGCACGGCAAGCGATACAAGGCAGCTTCGACCACCGTCGATCGTGAGAAGACCTATTCGCTCGACGAGGCGGTCAAGATCGTGAAGGCGAACGCCAAGGCGAAGTTCGACGAGACGATCGAGGTCGCCATGAACCTCGGCATCGATCCGCGCCACGCCGACCAGGCCGTGCGCGGCATGGTCGAATTGCCGAGCGGCACCGGCAAGACGGTGCGTGTGGCGGTGTTTGCCCGCGGTCCCAAGGCCGAGGAAGCCAAGAGCGCGGGCGCCGATCTGGTGGGCGCCGAGGATCTCGCCGAGAAGATCAATGGCGGCGAGATGAATTTCGACCGCTGCGTGGCGACGCCCGACATGATGGGTGTGGTCGGCCGGCTCGGTAAGGTGTTGGGTCCGCGCGGCCTGATGCCGAATCCCAAGCTTGGCACAGTGACTCAGGATGTGGCCGCTGCGGTGAAGGCCGCCAAGGCCGGCTCGATCGAGTTCCGCGCCGAGAAGGCCGGCATCGTCCACGCCGGCGTCGGCAAGGCCTCGTTCAGCGAGGAGGCGATCGCCGCCAACGTGAAGGCGCTGGTGACCGCGATCAGCCGCGCGAAGCCGAGCGGCGCCAAGGGCACCTTCATCAAGAAGGTGTCGATCGGTTCGACCATGGGACCGGGCATCAAGCTCGACCCTGCTTCTGCTCTCAACGTTTGA
PROTEIN sequence
Length: 232
MAHGKRYKAASTTVDREKTYSLDEAVKIVKANAKAKFDETIEVAMNLGIDPRHADQAVRGMVELPSGTGKTVRVAVFARGPKAEEAKSAGADLVGAEDLAEKINGGEMNFDRCVATPDMMGVVGRLGKVLGPRGLMPNPKLGTVTQDVAAAVKAAKAGSIEFRAEKAGIVHAGVGKASFSEEAIAANVKALVTAISRAKPSGAKGTFIKKVSIGSTMGPGIKLDPASALNV*