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SCN18_26_2_15_R2_B_scaffold_782

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_782_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..945
DNA (945bp) protein (315aa)
UDP-glucuronic acid decarboxylase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LZT7_RHITR
UDP-glucuronic acid decarboxylase
UDP-glucuronic acid decarboxylase {ECO:0000313|EMBL:AGB75590.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_26_2_15_R2_B_scaffold_782_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

945..1931
DNA (987bp) protein (329aa)
UDP-glucose 4-epimerase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LY32_RHITR
UDP-glucose 4-epimerase
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AGB75591.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_26_2_15_R2_B_scaffold_782_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1928..3760
DNA (1833bp) protein (611aa)
Putative cellulose synthase protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UV13_9RHIZ
Putative cellulose synthase protein {ECO:0000313|EMBL:ENN85510.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
glycosyl transferase, group 2 family protein
SCN18_26_2_15_R2_B_scaffold_782_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3797..5209
DNA (1413bp) protein (471aa)
Nucleotide sugar dehydrogenase n=1 Tax=Rhizobium sp. AP16 RepID=J2WWT6_9RHIZ
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EJK87523.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
rkpK; UDP-glucose 6-dehydrogenase
SCN18_26_2_15_R2_B_scaffold_782_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5211..5750
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWG0_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB75593.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_26_2_15_R2_B_scaffold_782_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5768..6715
DNA (948bp) protein (316aa)
Endoglucanase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LZP6_RHITR
endoglucanase family protein
Endoglucanase family protein {ECO:0000313|EMBL:AGB75594.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_26_2_15_R2_B_scaffold_782_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6746..7243
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LZU2_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB75595.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_26_2_15_R2_B_scaffold_782_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7375..7695)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LY36_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB75596.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_26_2_15_R2_B_scaffold_782_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8204..9334
DNA (1131bp) protein (377aa)
Transcriptional regulator, AraC family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWJ1_RHITR
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AGB75597.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_26_2_15_R2_B_scaffold_782_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9476..10483)
DNA (1008bp) protein (336aa)
Transcriptional regulator, LacI family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWG4_RHITR
transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AGB75598.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_26_2_15_R2_B_scaffold_782_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10811..11797
DNA (987bp) protein (329aa)
Putative sugar ABC transporter, substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LZQ0_RHITR
putative sugar ABC transporter, substrate-binding protein
Putative sugar ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGB75599.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_26_2_15_R2_B_scaffold_782_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11837..13468
DNA (1632bp) protein (544aa)
Putative sugar ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LZU6_RHITR
putative sugar ABC transporter, ATP-binding protein
Putative sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB75600.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_26_2_15_R2_B_scaffold_782_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13452..14474
DNA (1023bp) protein (341aa)
Putative sugar ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LY40_RHITR
putative sugar ABC transporter, permease protein
Putative sugar ABC transporter, permease protein {ECO:0000313|EMBL:AGB75601.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_26_2_15_R2_B_scaffold_782_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14435..15892)
DNA (1458bp) protein (486aa)
Drug:H+ antiporter-2(DHA2) family drug resistance MFS transporter n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IEX2_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig183, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46048.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
transporter, major facilitator superfamily MFS
SCN18_26_2_15_R2_B_scaffold_782_15
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15965..18007)
DNA (2043bp) protein (681aa)
Amidase n=1 Tax=Burkholderia sp. H160 RepID=B5WQX5_9BURK
Amidase {ECO:0000313|EMBL:EDZ99224.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
amidase
SCN18_26_2_15_R2_B_scaffold_782_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18047..18331)
DNA (285bp) protein (95aa)
SCN18_26_2_15_R2_B_scaffold_782_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18396..20021)
DNA (1626bp) protein (542aa)
Alcohol dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ18_9RHIZ
choline dehydrogenase protein
Choline dehydrogenase protein {ECO:0000313|EMBL:AIC31646.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
SCN18_26_2_15_R2_B_scaffold_782_18
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20018..21547)
DNA (1530bp) protein (510aa)
Putative L-xylulose kinase Lyx {ECO:0000313|EMBL:EYR78298.1}; EC=2.7.1.53 {ECO:0000313|EMBL:EYR78298.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
L-xylulose kinase protein (EC:2.7.1.53)
Putative L-xylulose kinase Lyx n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUG5_9RHIZ
SCN18_26_2_15_R2_B_scaffold_782_19
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21614..22456)
DNA (843bp) protein (281aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase class I {ECO:0000313|EMBL:ACP22212.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ACP22212.1};; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
Fructose-bisphosphate aldolase class I n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KQ54_RHISN
SCN18_26_2_15_R2_B_scaffold_782_20
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22429..24177)
DNA (1749bp) protein (583aa)
FAD dependent glycerol-3-phosphate dehydrogenase protein (EC:1.1.5.3)
FAD dependent glycerol-3-phosphate dehydrogenase protein {ECO:0000313|EMBL:AJD44649.1}; EC=1.1.5.3 {ECO:0000313|EMBL:AJD44649.1};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
Glycerol-3-phosphate dehydrogenase GlpD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CA42_9RHIZ
SCN18_26_2_15_R2_B_scaffold_782_21
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24190..25185)
DNA (996bp) protein (332aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Rhizobium sp. CF122 RepID=J2RYR0_9RHIZ
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:EJL57907.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
aldo/keto reductase
SCN18_26_2_15_R2_B_scaffold_782_22
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25182..26192)
DNA (1011bp) protein (337aa)
DeoR family transcriptional regulator protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SQQ0_RHIET
DeoR family transcriptional regulator protein
DeoR family transcriptional regulator protein {ECO:0000313|EMBL:AGS24034.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCN18_26_2_15_R2_B_scaffold_782_23
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26194..27183)
DNA (990bp) protein (330aa)
ABC transporter permease n=1 Tax=Rhizobium mongolense RepID=UPI0003B57A64
Ribose transport system permease protein RbsC {ECO:0000313|EMBL:EYR78303.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
rbsC-1; ribose ABC transporter permease protein RbsC 1
SCN18_26_2_15_R2_B_scaffold_782_24
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27206..28759)
DNA (1554bp) protein (518aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
rbsA-3; ribose ABC transporter ATP-binding protein RbsA 3 (EC:3.6.3.17)
Ribose import ATP-binding protein RbsA 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERY8_9RHIZ
SCN18_26_2_15_R2_B_scaffold_782_25
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28797..29825)
DNA (1029bp) protein (343aa)
Ribose ABC transporter substrate binding protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HP92_9RHIZ
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEC76989.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
ribose ABC transporter substrate binding protein
SCN18_26_2_15_R2_B_scaffold_782_26
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30105..33197)
DNA (3093bp) protein (1031aa)
Putative alpha-D-mannosidase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWJ5_RHITR
Putative alpha-D-mannosidase {ECO:0000313|EMBL:AGB75602.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
putative alpha-D-mannosidase
SCN18_26_2_15_R2_B_scaffold_782_27
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33194..33499)
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Rhizobium meliloti RepID=F7XAX2_SINMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH81156.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
Displaying 27 items

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