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SCN18_25_1_16_R1_B_scaffold_557

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_557_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..144
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TYS6_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM87162.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCN18_25_1_16_R1_B_scaffold_557_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

237..617
DNA (381bp) protein (127aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WKZ9_9BRAD
MFS transporter {ECO:0000313|EMBL:KJC49799.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
two-component response regulator
SCN18_25_1_16_R1_B_scaffold_557_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(926..3484)
DNA (2559bp) protein (853aa)
TIGR02302 family protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NU84_9BRAD
Chemotaxis protein {ECO:0000313|EMBL:KIZ39104.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_557_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3613..4878)
DNA (1266bp) protein (422aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Diaminopimelate decarboxylase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZ71_9BRAD
diaminopimelate decarboxylase
SCN18_25_1_16_R1_B_scaffold_557_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4885..5139)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VG00_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU46459.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCN18_25_1_16_R1_B_scaffold_557_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5225..6631)
DNA (1407bp) protein (469aa)
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase {ECO:0000255|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000255|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000255|HAMAP-Rule:MF_00006}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Argininosuccinate lyase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=ARLY_RHOPS
SCN18_25_1_16_R1_B_scaffold_557_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6742..7401
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E35D35
Thiol:disulfide interchange protein tlpA {ECO:0000313|EMBL:ERF81695.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
thioredoxin-like protein
SCN18_25_1_16_R1_B_scaffold_557_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7883..8317
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Afipia RepID=K8PED1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41012.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Activator of Hsp90 ATPase 1 family protein
SCN18_25_1_16_R1_B_scaffold_557_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8340..8966
DNA (627bp) protein (209aa)
Glutathione S-transferase domain n=1 Tax=Burkholderia graminis C4D1M RepID=B1FTT5_9BURK
Glutathione S-transferase {ECO:0000313|EMBL:ETR77098.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
glutathione S-transferase domain
SCN18_25_1_16_R1_B_scaffold_557_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8992..9729
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JCJ9_BURP8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC71000.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phymatum (strain DSM 17167 / STM815).;"
SCN18_25_1_16_R1_B_scaffold_557_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9751..10107
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUV5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36260.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_557_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10140..10538
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUV4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36259.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCN18_25_1_16_R1_B_scaffold_557_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10622..11008
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PRM1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41008.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCN18_25_1_16_R1_B_scaffold_557_14
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11078..11515
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YQR0_9BRAD
Putative uncharacterized protein {ECO:0000313|EMBL:EHR05166.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_557_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11507..11698)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUW3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36258.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_557_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11870..12742)
DNA (873bp) protein (291aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KIZ35142.1}; EC=1.1.1.157 {ECO:0000313|EMBL:KIZ35142.1};; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHH2_9BRAD
SCN18_25_1_16_R1_B_scaffold_557_17
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12852..13796)
DNA (945bp) protein (315aa)
Electron transfer flavoprotein, alpha subunit n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QI93_9BRAD
Electron transfer flavoprotein, alpha subunit {ECO:0000313|EMBL:EIG59499.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
electron transfer flavoprotein large subunit
SCN18_25_1_16_R1_B_scaffold_557_18
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13796..14545)
DNA (750bp) protein (250aa)
electron transfer flavoprotein subunit beta n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036579C1
Electron transfer flavoprotein, beta subunit {ECO:0000313|EMBL:EIG59500.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
electron transfer flavoprotein subunit beta
SCN18_25_1_16_R1_B_scaffold_557_19
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14687..15259)
DNA (573bp) protein (191aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000364FB3F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL79600.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_25_1_16_R1_B_scaffold_557_20
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15278..15472)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3M9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52559.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_557_21
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15673..16566
DNA (894bp) protein (298aa)
Ribonuclease BN n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07H13_RHOP5
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:ABJ08771.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCN18_25_1_16_R1_B_scaffold_557_22
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16493..17755)
DNA (1263bp) protein (421aa)
Histidine kinase {ECO:0000313|EMBL:ABE64214.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABE64214.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHT3_NITHX
histidine kinase
SCN18_25_1_16_R1_B_scaffold_557_23
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17836..18705)
DNA (870bp) protein (290aa)
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IGS3_9BRAD
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000313|EMBL:ERF81679.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
glutamyl-Q tRNA(Asp) synthetase
SCN18_25_1_16_R1_B_scaffold_557_24
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18743..19528
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NU60_9BRAD
DNA-3-methyladenine glycosidase {ECO:0000313|EMBL:KIZ35134.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
HhH-GPD
SCN18_25_1_16_R1_B_scaffold_557_25
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19525..20613
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z2X9_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM87121.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCN18_25_1_16_R1_B_scaffold_557_26
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20725..22509
DNA (1785bp) protein (595aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F50BB0
Precorrin-6X reductase {ECO:0000313|EMBL:ERF81667.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
flavin-containing monooxygenase
SCN18_25_1_16_R1_B_scaffold_557_27
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22600..23157
DNA (558bp) protein (186aa)
HNH endonuclease n=2 Tax=Oligotropha carboxidovorans RepID=B6JDH4_OLICO
HNH endonuclease
HNH endonuclease domain protein {ECO:0000313|EMBL:AEI07883.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_25_1_16_R1_B_scaffold_557_28
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23240..25039
DNA (1800bp) protein (600aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ABE64169.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABE64169.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
ATP-dependent DNA helicase RecQ n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHX8_NITHX
ATP-dependent DNA helicase RecQ
SCN18_25_1_16_R1_B_scaffold_557_29
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25293..25610
DNA (318bp) protein (106aa)
SCN18_25_1_16_R1_B_scaffold_557_trna_1
unknown

Not on your lists

comp(25728..25814)
DNA (87bp)
transferRNA Ser
Displaying items 1-30 of 34 in total

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