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SCN18_25_1_16_R1_B_scaffold_617_2

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 618..830

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspA n=10 Tax=Bradyrhizobiaceae RepID=B6JJC2_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 143
  • Evalue 5.00e-32
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 143
  • Evalue 1.40e-32
Cold shock protein CspA {ECO:0000313|EMBL:EKS34120.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 143
  • Evalue 7.00e-32

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGAGCATGGGAACCGTAAAGTGGTTTAACGCAACCAAGGGCTATGGCTTCATTCAGCCCGACGACGGCGGCAACGATGTGTTCGTTCACATCAGTGCTGTCGAGCGCGCCGGCCTCGGCACGCTGCGTGAAGGCCAGAAGATCAGCTACGAGATCGTCGCGGATCGCCGTTCCGGCAAATCCTCCGCAGACAACCTGCGGGCTGCTGGCTAA
PROTEIN sequence
Length: 71
MSMGTVKWFNATKGYGFIQPDDGGNDVFVHISAVERAGLGTLREGQKISYEIVADRRSGKSSADNLRAAG*