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SCN18_13_7_16_R1_B_scaffold_246

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Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_246_1
CN-SCN_Comamonas_56x, CN-SCN_Comamonas_56x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1659)
DNA (1659bp) protein (553aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00031D43C5
hypothetical protein
Tax=CG_Rhodof_03
SCN18_13_7_16_R1_B_scaffold_246_2
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1729..2727
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036EFCD4
LysR family transcriptional regulator
Transcriptional regulators, LysR family {ECO:0000313|EMBL:CBW75102.1}; TaxID=882378 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454).;"
SCN18_13_7_16_R1_B_scaffold_246_3
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2805..4292
DNA (1488bp) protein (496aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:AJE97100.1}; EC=1.2.1.8 {ECO:0000313|EMBL:AJE97100.1};; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003769AD7
SCN18_13_7_16_R1_B_scaffold_246_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4304..4735
DNA (432bp) protein (144aa)
2-aminomuconate deaminase n=1 Tax=Curvibacter lanceolatus RepID=UPI0003649929
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AAZ64846.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
SCN18_13_7_16_R1_B_scaffold_246_5
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4767..5330
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Oligella urethralis RepID=UPI00037392AC
3-hydroxyanthranilic acid dioxygenase
3-hydroxyanthranilic acid dioxygenase {ECO:0000313|EMBL:CDM22708.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_13_7_16_R1_B_scaffold_246_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5327..6322
DNA (996bp) protein (332aa)
aminocarboxymuconate-semialdehyde decarboxylase (EC:4.1.1.45)
Aminocarboxymuconate-semialdehyde decarboxylase {ECO:0000313|EMBL:AAZ64848.1}; EC=4.1.1.45 {ECO:0000313|EMBL:AAZ64848.1};; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
Aminocarboxymuconate-semialdehyde decarboxylase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46PT6_CUPPJ
SCN18_13_7_16_R1_B_scaffold_246_7
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6681..8057)
DNA (1377bp) protein (459aa)
Voltage-gated chloride channel n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPD9_9GAMM
Voltage-gated chloride channel {ECO:0000313|EMBL:EIM01331.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
chloride channel protein EriC
SCN18_13_7_16_R1_B_scaffold_246_8
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8260..9807
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036FCCFD
Putative efflux pump outer membrane protein {ECO:0000313|EMBL:ELX09404.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
RND efflux system outer membrane lipoprotein
SCN18_13_7_16_R1_B_scaffold_246_9
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9844..11034
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000360A3C3
Uncharacterized protein {ECO:0000313|EMBL:ELX09403.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
efflux transporter, RND family, MFP subunit
SCN18_13_7_16_R1_B_scaffold_246_10
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11045..14122
DNA (3078bp) protein (1026aa)
acriflavine resistance protein B n=1 Tax=Variovorax paradoxus RepID=UPI0003640C2C
Acriflavine resistance protein B {ECO:0000313|EMBL:ERE03102.1}; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans EGD-HP2.;"
multidrug efflux protein
SCN18_13_7_16_R1_B_scaffold_246_11
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14135..14668)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035DA74E
Methylated DNA-protein cysteine methyltransferase {ECO:0000313|EMBL:GAD22238.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
methylated-DNA--protein-cysteine methyltransferase
SCN18_13_7_16_R1_B_scaffold_246_12
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14714..15496)
DNA (783bp) protein (261aa)
ABC transporter-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6B6_9BURK
ABC transporter-like protein
ABC transporter-like protein {ECO:0000313|EMBL:AFU46789.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCN18_13_7_16_R1_B_scaffold_246_13
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15510..16592)
DNA (1083bp) protein (361aa)
Transport system permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG89_9BURK
Transport system permease {ECO:0000313|EMBL:EIK88229.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
transport system permease
SCN18_13_7_16_R1_B_scaffold_246_14
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16751..17752)
DNA (1002bp) protein (334aa)
Cobalamin ABC transporter periplasmic protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IBT2_9BURK
cobalamin ABC transporter periplasmic protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCN18_13_7_16_R1_B_scaffold_246_15
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17763..18605)
DNA (843bp) protein (281aa)
Bacterial transport system permease protein (Periplasmic binding protein) n=1 Tax=sediment metagenome PF68_9ZZZZ">RepID=D9PF68_9ZZZZ
periplasmic-binding protein
Tax=BJP_08E140C01_Burkholderiales_65_30
SCN18_13_7_16_R1_B_scaffold_246_16
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18602..19987)
DNA (1386bp) protein (462aa)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKM0_VARPS
cobyrinic acid a,c-diamide synthase
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:ACS19174.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCN18_13_7_16_R1_B_scaffold_246_17
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19987..21852)
DNA (1866bp) protein (622aa)
TonB-dependent receptor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0F9_ACIDE
TonB-dependent receptor {ECO:0000313|EMBL:EER61977.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
TonB-dependent receptor, plug
SCN18_13_7_16_R1_B_scaffold_246_18
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22268..22891)
DNA (624bp) protein (208aa)
2-hydroxychromene-2-carboxylate isomerase n=1 Tax=Polaromonas sp. CF318 RepID=J2LP93_9BURK
2-hydroxychromene-2-carboxylate isomerase {ECO:0000313|EMBL:EJL87113.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
2-hydroxychromene-2-carboxylate isomerase
SCN18_13_7_16_R1_B_scaffold_246_19
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23043..23816
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Polaromonas sp. CF318 RepID=J3CTH9_9BURK
enoyl-CoA hydratase/isomerase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCN18_13_7_16_R1_B_scaffold_246_20
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23828..24508
DNA (681bp) protein (227aa)
Glutathione S-transferase n=1 Tax=Polaromonas sp. CF318 RepID=J3D937_9BURK
Glutathione S-transferase {ECO:0000313|EMBL:EJL87116.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
glutathione S-transferase domain-containing protein
SCN18_13_7_16_R1_B_scaffold_246_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24512..25141
DNA (630bp) protein (210aa)
2-hydroxychromene-2-carboxylate isomerase n=1 Tax=Polaromonas sp. CF318 RepID=J3CSY5_9BURK
2-hydroxychromene-2-carboxylate isomerase {ECO:0000313|EMBL:EJL77884.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
DSBA oxidoreductase
SCN18_13_7_16_R1_B_scaffold_246_22
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25117..25833)
DNA (717bp) protein (239aa)
cAMP-binding protein n=1 Tax=Polaromonas sp. CF318 RepID=J3CSY2_9BURK
putative Crp/Fnr family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCN18_13_7_16_R1_B_scaffold_246_23
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25920..26912)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3D8Y5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL87114.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_246_24
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27068..27310
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1ECT9_9BURK
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_246_25
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27307..27636
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TJN5_9BURK
hypothetical protein
Tax=GWA2_Curvibacter_64_110_curated
SCN18_13_7_16_R1_B_scaffold_246_26
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27895..28719
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0G2_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER61980.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_246_27
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28793..29476)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00031F4C95
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
SCN18_13_7_16_R1_B_scaffold_246_28
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29476..30858)
DNA (1383bp) protein (461aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
UPI0003A9E09D related cluster n=1 Tax=unknown RepID=UPI0003A9E09D
coproporphyrinogen III oxidase
SCN18_13_7_16_R1_B_scaffold_246_29
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31019..31738
DNA (720bp) protein (240aa)
transcriptional regulator n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000382F0D4
Uncharacterized protein {ECO:0000313|EMBL:EKD97717.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
CRP/FNR family transcriptional regulator
SCN18_13_7_16_R1_B_scaffold_246_30
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31796..32281)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C211_9BURK
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
Displaying items 1-30 of 84 in total

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