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SCN18_13_7_16_R1_B_scaffold_698

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_698_trna_1
unknown

Not on your lists

comp(98..168)
DNA (71bp)
transferRNA Gly
SCN18_13_7_16_R1_B_scaffold_698_1
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(186..1517)
DNA (1332bp) protein (444aa)
UDP-galactopyranose mutase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W5A8_ACISJ
amine oxidase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCN18_13_7_16_R1_B_scaffold_698_2
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1596..2438)
DNA (843bp) protein (281aa)
phytoene synthase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395BC5B
Phytoene synthase {ECO:0000313|EMBL:EXU79510.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
phytoene synthase
SCN18_13_7_16_R1_B_scaffold_698_3
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2451..3314)
DNA (864bp) protein (288aa)
Phytoene synthase-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5G9_RAMTT
phytoene synthase
Tax=GWA2_Curvibacter_64_110_curated
SCN18_13_7_16_R1_B_scaffold_698_4
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3311..4264)
DNA (954bp) protein (318aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Thioredoxin reductase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WB78_ACISJ
thioredoxin reductase
SCN18_13_7_16_R1_B_scaffold_698_5
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4457..5131
DNA (675bp) protein (225aa)
cAMP-binding protein n=1 Tax=Polaromonas sp. CF318 RepID=J3DDS3_9BURK
cAMP-binding protein {ECO:0000313|EMBL:EJL89904.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
Crp/FNR family transcriptional regulator
SCN18_13_7_16_R1_B_scaffold_698_6
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5206..7545
DNA (2340bp) protein (780aa)
cell division protein FtsK n=1 Tax=Curvibacter lanceolatus RepID=UPI00035F8474
DNA translocase FtsK
Cell divisionftsk/spoiiie {ECO:0000313|EMBL:GAD20600.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCN18_13_7_16_R1_B_scaffold_698_7
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7545..8288
DNA (744bp) protein (248aa)
Outer-membrane lipoprotein carrier protein n=1 Tax=Variovorax sp. CF313 RepID=J2KYJ0_9BURK
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
outer membrane lipoprotein carrier protein LolA
SCN18_13_7_16_R1_B_scaffold_698_8
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8440..9483)
DNA (1044bp) protein (348aa)
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9X4_9BURK
glutamate--tRNA ligase
Tax=GWA2_Burkholderiales_64_37_curated
SCN18_13_7_16_R1_B_scaffold_698_9
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9659..10705)
DNA (1047bp) protein (349aa)
UPI0003D3E2F5 related cluster n=1 Tax=unknown RepID=UPI0003D3E2F5
Predicted NAD/FAD-dependent oxidoreductase {ECO:0000313|EMBL:GAD20409.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_698_10
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10715..11665)
DNA (951bp) protein (317aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J0K320_9BURK
LysR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EJE48765.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
SCN18_13_7_16_R1_B_scaffold_698_11
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11753..12454
DNA (702bp) protein (234aa)
quercetin 2,3-dioxygenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036D5D29
Pirin-related protein {ECO:0000313|EMBL:GAD20407.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
pirin
SCN18_13_7_16_R1_B_scaffold_698_12
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12554..12985
DNA (432bp) protein (144aa)
doxx family protein; K15977 putative oxidoreductase id=5083287 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
doxx family protein
Tax=BJP_08E140C01_Burkholderiales_65_30
SCN18_13_7_16_R1_B_scaffold_698_13
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13061..13420)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI0003787041
Uncharacterized protein {ECO:0000313|EMBL:CDI01633.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_698_14
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13535..13903)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y3Q1_RAMTT
Uncharacterized protein {ECO:0000313|EMBL:CDI01634.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_698_15
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13900..14292)
DNA (393bp) protein (131aa)
Roadblock/LC7 family protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V146_VARPE
roadblock/lc7 family protein
Roadblock/LC7 family protein {ECO:0000313|EMBL:ADU39069.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCN18_13_7_16_R1_B_scaffold_698_16
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14300..14836)
DNA (537bp) protein (179aa)
GTP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000374F99B
Uncharacterized protein {ECO:0000313|EMBL:CDI01636.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_698_17
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14861..15595)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CJU1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL72946.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_698_18
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15869..19417
DNA (3549bp) protein (1183aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KPE7_9BURK
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCN18_13_7_16_R1_B_scaffold_698_19
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19644..20753)
DNA (1110bp) protein (370aa)
Protein TolA n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X0M2_COMTE
Protein TolA {ECO:0000313|EMBL:EED66372.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
cell envelope protein TolA
SCN18_13_7_16_R1_B_scaffold_698_20
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20750..21160)
DNA (411bp) protein (137aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICQ6_9BURK
Biopolymer transporter ExbD {ECO:0000313|EMBL:KJA10824.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
biopolymer transport protein ExbD/TolR
SCN18_13_7_16_R1_B_scaffold_698_21
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21162..21875)
DNA (714bp) protein (238aa)
Protein TolQ n=2 Tax=Alicycliphilus denitrificans RepID=E8TZ33_ALIDB
protein tolq
Protein TolQ {ECO:0000313|EMBL:AEB84621.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_13_7_16_R1_B_scaffold_698_22
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21872..22288)
DNA (417bp) protein (139aa)
Tol-pal system-associated acyl-CoA thioesterase n=1 Tax=Acidovorax sp. CF316 RepID=J0TXA4_9BURK
Tol-pal system-associated acyl-CoA thioesterase {ECO:0000313|EMBL:EJE48542.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
tol-pal system-associated acyl-CoA thioesterase
SCN18_13_7_16_R1_B_scaffold_698_23
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22299..23516)
DNA (1218bp) protein (406aa)
Putative aminotransferase n=1 Tax=Variovorax paradoxus B4 RepID=T1XCI2_VARPD
putative aminotransferase
Putative aminotransferase {ECO:0000313|EMBL:AGU50268.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCN18_13_7_16_R1_B_scaffold_698_24
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23513..24049)
DNA (537bp) protein (179aa)
N utilization substance protein B homolog n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4V4_RAMTT
nusB; N utilization substance protein B
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCN18_13_7_16_R1_B_scaffold_698_25
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24046..24510)
DNA (465bp) protein (155aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4V5_RAMTT
ribH; riboflavin synthase subunit beta
SCN18_13_7_16_R1_B_scaffold_698_26
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24513..25658)
DNA (1146bp) protein (382aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MBL5_ACIET
3,4-dihydroxy-2-butanone 4-phosphate synthase
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:ACM33694.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCN18_13_7_16_R1_B_scaffold_698_27
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25894..26847
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00035EBD4D
auxin efflux carrier
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCN18_13_7_16_R1_B_scaffold_698_28
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26898..27380)
DNA (483bp) protein (161aa)
Putative glyoxalase domain-containing dioxygenase n=1 Tax=Variovorax paradoxus B4 RepID=T1X4K1_VARPD
Biphenyl-2,3-diol 1,2-dioxygenase III-related protein {ECO:0000313|EMBL:EZP46032.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
putative glyoxalase domain-containing dioxygenase
SCN18_13_7_16_R1_B_scaffold_698_29
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27409..27738)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDK8_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM93647.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Displaying items 1-30 of 37 in total

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