ggKbase home page

SCN18_13_7_16_R1_B_scaffold_1548

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_1548_1
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..861)
DNA (861bp) protein (287aa)
carbohydrate porin n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0002D93E82
carbohydrate-selective porin, OprB family protein
Carbohydrate-selective porin {ECO:0000313|EMBL:EAY70715.1}; Carbohydrate-selective porin, OprB family protein {ECO:0000313|EMBL:AJY09637.1}; TaxID=350701 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia dolosa AU0158.;"
SCN18_13_7_16_R1_B_scaffold_1548_2
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(883..2295)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZKM7_9RHOO
Ferredoxin
Ferredoxin {ECO:0000313|EMBL:CDM25003.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_13_7_16_R1_B_scaffold_1548_3
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2358..3215)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZHF8_9RHOO
High-affinity iron permease
High-affinity iron permease {ECO:0000313|EMBL:CDM25005.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_13_7_16_R1_B_scaffold_1548_4
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3230..3568)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9Z9X9_9RHOO
putative exported protein
Putative exported protein {ECO:0000313|EMBL:CDM25006.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_13_7_16_R1_B_scaffold_1548_5
unknown

Not on your lists

comp(3574..3747)
DNA (174bp) protein (58aa)

This feature has no annotations

SCN18_13_7_16_R1_B_scaffold_1548_6
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3749..4279)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AMI7_9RHOO
Periplasmic protein p19 involved in high-affinity Fe2+ transport
Periplasmic protein p19 involved in high-affinity Fe2+ transport {ECO:0000313|EMBL:CDM25007.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_13_7_16_R1_B_scaffold_1548_7
CN-SCN_Comamonas_56x, CN-SCN_Comamonas_56x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4397..5716)
DNA (1320bp) protein (440aa)
Zinc protease protein-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYU6_RAMTT
zinc protease protein
Tax=GWA2_Curvibacter_64_110_curated
SCN18_13_7_16_R1_B_scaffold_1548_8
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5766..7184)
DNA (1419bp) protein (473aa)
Zinc protease protein-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYU7_RAMTT
zinc protease protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCN18_13_7_16_R1_B_scaffold_1548_9
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7266..8363
DNA (1098bp) protein (366aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Selenide, water dikinase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WV88_9BURK
selD; Selenium donor protein
SCN18_13_7_16_R1_B_scaffold_1548_10
scnpilot_dereplicated_Eukaryote_unknown_9, scnpilot_dereplicated_Eukaryote_unknown_9, scnpilot_dereplicated_Eukaryote_unknown_9, scnpilot_dereplicated_Eukaryote_unknown_9, scnpilot_dereplicated_Eukaryote_unknown_9, Eukaryote

Not on your lists

comp(8407..11064)
DNA (2658bp) protein (886aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI000366010C
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ADV82531.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
SCN18_13_7_16_R1_B_scaffold_1548_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11583..12506
DNA (924bp) protein (308aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
2-dehydropantoate 2-reductase (EC:1.1.1.169)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8R989_PSEAI
SCN18_13_7_16_R1_B_scaffold_1548_12
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12559..13704
DNA (1146bp) protein (382aa)
Signal recognition particle receptor FtsY n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U1B7_ALIDB
signal recognition particle-docking protein ftsy
Tax=GWA2_Burkholderiales_64_37_curated
SCN18_13_7_16_R1_B_scaffold_1548_13
unknown

Not on your lists

13788..13904
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 13 items

View Taxonomy