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SCN18_13_7_16_R1_B_scaffold_182_6

Organism: SCN18_13_7_16_R1_B_Nakamurella_69_21

near complete RP 44 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 3758..5608

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B454F5 similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 576.0
  • Bit_score: 580
  • Evalue 1.10e-162
Type VI secretion protein {ECO:0000313|EMBL:KGM17834.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 573.0
  • Bit_score: 612
  • Evalue 3.60e-172
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 575.0
  • Bit_score: 563
  • Evalue 3.80e-158

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Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1851
ATGACCCGGCCGCGGCAGGCGGTGCGCCCGTCGAACGACACCGCCTGGGCCGCCGTCATTCTCGGTGCCGCTGGGCTGGTTGGTGCGCTGTGGGTGGGTGGGGCGCTCGCTCTCGTCATCGTCGGTGGGCAACCGCGCGGGTATCTGCTGGCCGGTGTCCGAGCGCTCGCGCACATGTCCCGGCCCGCAGCGGCGTGGGGCGAGATGGCCCCGGGCCCCGGCGCGTATTGGACTGTTACTGCGGTCGTCGTGGCCGCCGCTGTGGTGTTGGCGGTCGGGGCGCGGCGCCTGTTCGTGGCAACTCCGAGCCGGGTGGACGTGGACCGGCTGCCGGGAACGGCGACGCCCCGGGAGATCCGTCATACCTGCTCGCCCCGCGCGATACGCAAACGCGGCCGACACCTACGCCCCTCCCTCGAAAGACCGGCGCCGCGCGATGTCGGGTTCCGCGTCGGGGTCGCCCGCGGCATCGAGACGTGGACGTCGGTGGAGGACTCCGTCGTGGTGCTCGGTGCGGCACGCTCCGGCAAGGACCGCTACCTGGTCGTCAATGTCATCCTCGACGCCCCCGGCGCGGTGATCGCGACCTCCACCCGGCCGGACAACATCGCGCAAACCATCGCCGCCAGAAAGGCTCGTGGTCCGGTCGCTGTGTTTGACCCGCAACATCTCGCAGGTGACAGTCAGGTTGGCCTGCGCTGGTCGCTGACCCGCGGCTGCGAGAAGCCGATGACGGCAATGATCCGCGCAGCCGGCCTCGCCGCAGGCAGCGGTAAGGGCGTCGACGACGGCTCGTTCTGGCAGGGGCAGACCGAGGCCGCGCTCCGCGCTCTGCTCATGGCCGCCGCTCTGGATCATCGTGGCGCGGCCGACTTGTACCGGTGGTCGCTGACCCCGGCGGCGGTCCAGGACGCGATCGCGATCCTCGACACGAACCCGCGCGCCCCTGCTGGCTGGGCCACCGCCCTGAACGCTGTGGCCGACTCCGATCCTCGGCAGCGCGACTCCGTCTGGCTCGGCGTCCGACAATCACTGGCCGCGCTCGGCGACCCCGACGTCCTCGCCTCTGTCTCGCCCGGCCCGGGGGAGGAGTTCGATCCGGAAGCGTTTATCCGTGACACGGGCACGTTGTACCTGGTGGGGACCGCAACCGGAGCGGGAGCTGCGGCGAATCTGGTCGCGGCGTTCATCGAGGACATCGTCGAAACCGCACGGCATCTCGCCGCCGAGTCACCCGCCGCGCGCCTGGATCCGCCGATCACGATGATGCTCAACGAGATCGGCAACCTCGCACCCCTGCCATCCCTGCCCACGCTCATGTCGGAGGGCGGCGGCACCGGCATCTGCACGTGGGCGATCCTGCAATCCCTCGCCCAGGCCCGCCACAAGTGGGGCGAACAAGCAGCTTCGACTCTCTGGGACGCGGCCACAGCGAAAATCATCCTCGGCGGCGGCAGCGACGCCGCCGACATGCGCGACCTTGTCTTCGTGATCGGCGACCGCGACGACGTCACCTGGGCGGAAACCCGCAGCCATGACGGCACCCGCAGCCGCTCATCGTCACTGCGCCGCATTCCCATCCTGGACTCCGGTCCGCTCCGCACGCTCCCGGACGGCACTGCGGTCCTACTCCTCCGGTCCATGCCACCGGCCGTGATTCGCATGCGCTCCTGGATGCACCGCAAAGAAGTGGAATCGGCAGGTCGACCGGCAGTGGCCGACACCGGACATCCGCCAGGTTTCGCGCCTCGAAAGGGCAAGAGTGTTGATATCGGCGAAATGCAAGAGCATGATGACGTGACTTGCGTCACTCTCGCATCTGGCGTCACCTTGAGGGAGGTGACGAACTGA
PROTEIN sequence
Length: 617
MTRPRQAVRPSNDTAWAAVILGAAGLVGALWVGGALALVIVGGQPRGYLLAGVRALAHMSRPAAAWGEMAPGPGAYWTVTAVVVAAAVVLAVGARRLFVATPSRVDVDRLPGTATPREIRHTCSPRAIRKRGRHLRPSLERPAPRDVGFRVGVARGIETWTSVEDSVVVLGAARSGKDRYLVVNVILDAPGAVIATSTRPDNIAQTIAARKARGPVAVFDPQHLAGDSQVGLRWSLTRGCEKPMTAMIRAAGLAAGSGKGVDDGSFWQGQTEAALRALLMAAALDHRGAADLYRWSLTPAAVQDAIAILDTNPRAPAGWATALNAVADSDPRQRDSVWLGVRQSLAALGDPDVLASVSPGPGEEFDPEAFIRDTGTLYLVGTATGAGAAANLVAAFIEDIVETARHLAAESPAARLDPPITMMLNEIGNLAPLPSLPTLMSEGGGTGICTWAILQSLAQARHKWGEQAASTLWDAATAKIILGGGSDAADMRDLVFVIGDRDDVTWAETRSHDGTRSRSSSLRRIPILDSGPLRTLPDGTAVLLLRSMPPAVIRMRSWMHRKEVESAGRPAVADTGHPPGFAPRKGKSVDIGEMQEHDDVTCVTLASGVTLREVTN*