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SCN18_13_7_16_R1_B_scaffold_182

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_182_1
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..682
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X693_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV76864.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCN18_13_7_16_R1_B_scaffold_182_2
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(705..1175)
DNA (471bp) protein (157aa)
guanosine-3,5-bis(diphosphate) 3-diphosphatase n=1 Tax=Kocuria rhizophila RepID=UPI000361267D
Phosphohydrolase {ECO:0000313|EMBL:KIC70491.1}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_182_3
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1389..1679
DNA (291bp) protein (97aa)
SCN18_13_7_16_R1_B_scaffold_182_4
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1753..2469
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B53EEF
SCN18_13_7_16_R1_B_scaffold_182_5
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2679..3761
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034CC8D7
Uncharacterized protein {ECO:0000313|EMBL:CDJ99389.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_182_6
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3758..5608
DNA (1851bp) protein (617aa)
type VI secretion protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B454F5
Type VI secretion protein {ECO:0000313|EMBL:KGM17834.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_182_7
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5609..6331
DNA (723bp) protein (241aa)
UPI0003C91C81 related cluster n=1 Tax=unknown RepID=UPI0003C91C81
SCN18_13_7_16_R1_B_scaffold_182_8
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6325..7206
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XFS3_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV78034.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCN18_13_7_16_R1_B_scaffold_182_9
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7224..7898
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RKJ1_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG02410.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCN18_13_7_16_R1_B_scaffold_182_10
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7905..8786
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F0R1_MODMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH89224.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
SCN18_13_7_16_R1_B_scaffold_182_11
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8783..10270
DNA (1488bp) protein (496aa)
Flp pilus assembly protein, ATPase CpaF n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RKJ3_BLASD
Flp pilus assembly protein, ATPase CpaF
Flp pilus assembly protein, ATPase CpaF {ECO:0000313|EMBL:CCG02412.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCN18_13_7_16_R1_B_scaffold_182_12
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10267..11187
DNA (921bp) protein (307aa)
Type II secretion system protein n=3 Tax=Amycolatopsis mediterranei RepID=D8I534_AMYMU
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:AEK45753.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCN18_13_7_16_R1_B_scaffold_182_13
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11184..12080
DNA (897bp) protein (299aa)
Flp pilus assembly protein TadC n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RKJ5_BLASD
Type II secretion protein F {ECO:0000313|EMBL:KGM12782.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
Flp pilus assembly protein TadC
SCN18_13_7_16_R1_B_scaffold_182_14
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12123..12329
DNA (207bp) protein (69aa)
SCN18_13_7_16_R1_B_scaffold_182_15
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12356..12781
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNM5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO63070.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
TadE family protein
SCN18_13_7_16_R1_B_scaffold_182_16
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12778..13278
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rhodococcus erythropolis RepID=Q6XNC5_RHOER
Uncharacterized protein {ECO:0000313|EMBL:AAP73906.1}; TaxID=1833 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (Arthrobacter picolinophilus).;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_182_17
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13275..13766
DNA (492bp) protein (164aa)
Putative membrane protein n=1 Tax=Arthrobacter sp. Rue61a RepID=J9JEL1_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EYR65230.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_182_18
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13763..17230
DNA (3468bp) protein (1156aa)
Peptidoglycan-binding LysM n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1C0V9_XYLCX
Uncharacterized protein {ECO:0000313|EMBL:EWT06796.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
peptidoglycan-binding LysM
SCN18_13_7_16_R1_B_scaffold_182_19
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17227..17886
DNA (660bp) protein (220aa)
type 4 prepilin peptidase 1 (EC:3.4.23.43)
Leader peptidase (Prepilin peptidase)/N-methyltransferase n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2WSL0_9PSEU
Leader peptidase (Prepilin peptidase)/N-methyltransferase {ECO:0000313|EMBL:EME51746.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
SCN18_13_7_16_R1_B_scaffold_182_20
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17966..19933)
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U1Y2J6_9MICC
Uncharacterized protein {ECO:0000313|EMBL:ERI35664.1}; TaxID=1349820 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-YN10.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_182_21
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20160..21632)
DNA (1473bp) protein (491aa)
Tax=RBG_16_OP11_Levybacteria_35_11_curated
SCN18_13_7_16_R1_B_scaffold_182_22
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21700..22380)
DNA (681bp) protein (227aa)
SCN18_13_7_16_R1_B_scaffold_182_23
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22377..22832)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B33B3A
Uncharacterized protein {ECO:0000313|EMBL:KGM17830.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_182_24
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23022..23243
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=A5H254_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ABK91969.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
excisionase family DNA-binding
SCN18_13_7_16_R1_B_scaffold_182_25
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23244..26516
DNA (3273bp) protein (1091aa)
hypothetical protein n=1 Tax=Rhodococcus erythropolis RepID=UPI0002FBC218
Putative helicase {ECO:0000313|EMBL:CCM64354.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
helicase
SCN18_13_7_16_R1_B_scaffold_182_26
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26509..27177
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XNE9_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK36599.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCN18_13_7_16_R1_B_scaffold_182_27
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27187..29289
DNA (2103bp) protein (701aa)
hypothetical protein n=1 Tax=Rhodococcus erythropolis RepID=UPI0003662656
DNA methylase {ECO:0000313|EMBL:KHS49647.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
mod; adenine-specific DNA-methyltransferase
SCN18_13_7_16_R1_B_scaffold_182_28
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29294..32452
DNA (3159bp) protein (1053aa)
Putative type III restriction-modification system restriction subunit (Res) {ECO:0000313|EMBL:CCM64351.1}; EC=3.1.21.5 {ECO:0000313|EMBL:CCM64351.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
res; type III restriction-modification system restriction subunit (EC:3.1.21.5)
Putative type III restriction-modification system restriction subunit (Res) n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z4Z4_9ACTN
SCN18_13_7_16_R1_B_scaffold_182_29
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32458..33924
DNA (1467bp) protein (489aa)
Coiled-coil protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XZ83_9ACTO
Coiled-coil protein {ECO:0000313|EMBL:EON24280.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_182_30
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33934..36204
DNA (2271bp) protein (757aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BCD4_9MICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY02949.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
Displaying items 1-30 of 105 in total

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