ggKbase home page

SCN18_13_7_16_R1_B_scaffold_182_18

Organism: SCN18_13_7_16_R1_B_Nakamurella_69_21

near complete RP 44 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 13763..17230

Top 3 Functional Annotations

Value Algorithm Source
Peptidoglycan-binding LysM n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1C0V9_XYLCX similarity UNIREF
DB: UNIREF100
  • Identity: 29.6
  • Coverage: 1123.0
  • Bit_score: 333
  • Evalue 5.60e-88
Uncharacterized protein {ECO:0000313|EMBL:EWT06796.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.1
  • Coverage: 1178.0
  • Bit_score: 360
  • Evalue 6.00e-96
peptidoglycan-binding LysM similarity KEGG
DB: KEGG
  • Identity: 29.4
  • Coverage: 1216.0
  • Bit_score: 335
  • Evalue 3.20e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3468
ATGATCCGTTTCGTCGCTCACGCCCTCAGGCGCCTACTCGCCGCCATCGTGCTGCTGGCCCTGCTCGTCGGGGCGCCGTGGGCGCTGTGGAATCTCGGCCGGCCACACCTACCCAACCACCTACCGGGCGTCACCGAAGTCTGGGCCGCGCTCACCGAACGGGACACCGGCCAGATCCTGCTCGGCACGCTGACGATCATCGGCTTCGCGGCGTGGGCCGTCTTCGCCATCAGCGTCGCCGCCGAAGCAGCTGCCGCCATCACGCACACACCCGCAATCCGACTGCCCGGTCTGCGCCTCCCGCAAACCCTCGCCGCAGGCCTGATCGCCCTGATCATCACCACCAGCCCCGCGCTCGCCGCACCTGCCCACGCCGCAACACTGCCCGCCCTGCCCAACGGCGCGGTCGCGGCAGTCGCCGTCCAGACACCACCGATGACGGACGCGGCGGCAGACAGCACCGCGCTGCGGCCGACACTCACCCATGACGCGGTGCCTGGCTCTACTCGTTCATGGCCGGCGGGGCGGCCCACCCCCGCCCACAGCGCAGACCAGGGAAGCAACAGCGGGCCGACCTGGACTGTGCAGAAGGGCGACACCCTGTGGGACATCGCCGAAGTCACCCTCGGCGACCCGCTGCGATGCACCGAGATCGGCGAGCTCAACCGCGGCCACATCCAGCCCGACGGCAAAACGTTCCACTCGGACGACTTCCTGCTGCCCGGCTGGCAGATCCAGCTGCCCGCAGGCGCGAAACTGCCGCCCGCACAAACAAACTCGCCGACACCGGCCGAAGATCAAGCGATACCCATGGACGTGACCGTCGAACCCGGCGACACGCTCTCCCAGATCGCGCTCGACACCCTCGGCGACGCCAGCCAGTACCCGGCGCTCGCCGCCGCCAACCACATCACCAACCCCGACCTGATCCACCCCGGCCAAATCATCCACATCCCCGCCCCGACCGCACCAGGCAGCGACACCACACAGCAGACCGGAACCGACGACACCACCGCTCCGAACACCACCGACGACACCGAGACAAGCAGCTCCGAAGCTCACGAACCGGCGACGGGCAGCAGCGACGACAGCGACCAGGGCACGGCATCCCCGCAGGACGACTCCGAAACCCCGACGACCGCGGCAGGCGACAGCAGCGCAACAGCCGAGGACGAAACGCCAGCGGTGGAATCTCCGTCATCGGAGCACACCGGATCGAACCCCGGGGAGGCAAGCGCCGCGACCTCGCAAGCCGCACCCGCCCCAACAGCGGCGCCCGTTGTGACGCCGCCGGTTTCGGTCGGCAATGCCAGCACTGAATCTGCGCCAGCGATGAACTCGGACGGCGCCATTGCCACGCCGTCGACCCGCACACTCGTCCTCGGCGGCATCACCGGCCTGACCGCAGCCCTCGCCTGGGCCGGGCTTCTACTCACCAGACGGCGCCTGCAGCAGCGCCGCCGGCCCGGCGACGAACCCGTGCCACCCCTCGAACTGGAGGCCCGAGTCGAGCAGGCCCTGCGCCGTAACGCCGATACCACCACACCGCGACGTATCGACCGGGCTCTGCGGCAGGCCACCGCAGCGCTCGCCAACCGCTCGGACGTCGTCATCAGCGGGGCACTGATCGGTGCCGAAGCGATCGAAATGCGCCCGGCCACACCCGCCGACCCACCGCACCCGTTCACCGGCACACAGGCCGCATGGACCCTGCCCCTGCCCGATACCGACACCAGCGATGAGGACGGACCAGAGCGCCTCGCTGCCCTGCCAGCGCTTGTCACCATAGGCACCACTGGCGACGGTCGCATCGCCATGCTCAACATCGAAACCATCGGCGCGCTGCACATCGGCGGTGACGAGGCCCGCGCCCGAGAACTCGCCAACCACCTGATCGTCGAGCTGTCCCAATCGCCGTGGACCGACGGAATCCACCTGCACCTCACCGACCGACCCGGCGGACTACGCGCACTGGACGAGGACCGCATCCAACCCGCAACCGACCTTGAACGCGAAATGAGAAGCCTTGCCGCGCAAGCGAAGACGATCCGTGAACTCTTGGACGGACGCAGCATCACCCAGGCCCGTACCGACACCACCTACGCCGACGCTTGGGAACCACACCTCCTCATCACCGACGGCAACGACCTACCCGCAGACAGGGCCACCACAGGCCTGATCGACCAGCTCCAGGCCGGGCCGCCCGCGGCAGCCGGACTGATTACCACCGGCCGAAACCCCGGCATCGCGGCCGACATACACGTCGCCGCTGACGGCAGCGCGCTCATCCCGGCGATCTTCCCCGACGACGTGATCACGGCAGCCGCCGTCACCGACGCGGAACTCGCCGCCATCGTCGGACTCTTCGCCGCCAGCTCGGAAAGCCGGGCCGACAACACGGGCCACGTCGGCGACACCGCACCCGGCGACGAGTCCGAATGCGTCGAAGGCGCAGACATGATCGACACCACCGCGATCGACGCGGATCTGGCCACGAACATCGTCATACTCGACGGCAACTGTGCGACAGCGGATCTCACCGTGCCTGACGCCATCGGCGTCGATGACGGACATGCGCGCAACCGCCCCGTCGCCGACGCCGTCGGTGCGAGGCAGACCCTCAGCCCGGATCCGGAACTCGATAGCGACCTCGCCGAATGGCTGAGCAACGACCTTCGCCGTCCGAAAATCGCGATTCTCGGGCCAGCCGCGGTGGTCGGTCTCGGCCCCGCGCCGCAGCGACCCCAGCCGCGACAGATCGAAATGGCCGTCTACCTCGCCCTGCACCACCAGGGCGTAACCGTCGACAGATTCACCGACGACCTCTGGCCCGACGGCAACCCGCCAACACCAGGGGGCCGCCGGGTCGCGATCTCGCGGCTTCGCAGTTGGCTCGGAAACGATCCTGAAACGGGGGAGGCGTTCGTGCCGAACCGGGAAAGTGGCTATTACATCACCGACCGGCTGTTGGACTCCGACCTGTTCACCCGCCTGGTGCACCGCAGCGACCGGCGCACACACGCAGGTGATGTCCGCGAAGCGCTCAGCGACCTGCAACGCGCCCTCGCCCTGGTGCGTGGACCGATTCTGCCGGAGGCAGGCGGACACGAGTATGCGTGGCTCGCCGCCGCAGATCGACTCGAAGATCGGACACTACCTGTAGCCGTTGTGGACGCGGCCCATTTCGCAACCGACCTTGCGCTCGCCATGGGAGATAGCGACGCCGCCGAATCCGCAGCGATGGTCGGAAGGTCCGTCCAGCCCTACAGCCTCATCCCGCTGTGCGACCTTATCCGCGTCGCCCAATACTGCGGAGACGGTGAGACCGCCGCCGCCTGGGCGCGCGCCACGCTCGACGCAGCCGACGCCGACGTTCCCGCCGAACTACCGGAACACGTCCGGGACCACGTTGCTGCGGCACTGGCCGGTAGCAGTCGGGACCGACTAACCACCGGCGCGCGACAGTGA
PROTEIN sequence
Length: 1156
MIRFVAHALRRLLAAIVLLALLVGAPWALWNLGRPHLPNHLPGVTEVWAALTERDTGQILLGTLTIIGFAAWAVFAISVAAEAAAAITHTPAIRLPGLRLPQTLAAGLIALIITTSPALAAPAHAATLPALPNGAVAAVAVQTPPMTDAAADSTALRPTLTHDAVPGSTRSWPAGRPTPAHSADQGSNSGPTWTVQKGDTLWDIAEVTLGDPLRCTEIGELNRGHIQPDGKTFHSDDFLLPGWQIQLPAGAKLPPAQTNSPTPAEDQAIPMDVTVEPGDTLSQIALDTLGDASQYPALAAANHITNPDLIHPGQIIHIPAPTAPGSDTTQQTGTDDTTAPNTTDDTETSSSEAHEPATGSSDDSDQGTASPQDDSETPTTAAGDSSATAEDETPAVESPSSEHTGSNPGEASAATSQAAPAPTAAPVVTPPVSVGNASTESAPAMNSDGAIATPSTRTLVLGGITGLTAALAWAGLLLTRRRLQQRRRPGDEPVPPLELEARVEQALRRNADTTTPRRIDRALRQATAALANRSDVVISGALIGAEAIEMRPATPADPPHPFTGTQAAWTLPLPDTDTSDEDGPERLAALPALVTIGTTGDGRIAMLNIETIGALHIGGDEARARELANHLIVELSQSPWTDGIHLHLTDRPGGLRALDEDRIQPATDLEREMRSLAAQAKTIRELLDGRSITQARTDTTYADAWEPHLLITDGNDLPADRATTGLIDQLQAGPPAAAGLITTGRNPGIAADIHVAADGSALIPAIFPDDVITAAAVTDAELAAIVGLFAASSESRADNTGHVGDTAPGDESECVEGADMIDTTAIDADLATNIVILDGNCATADLTVPDAIGVDDGHARNRPVADAVGARQTLSPDPELDSDLAEWLSNDLRRPKIAILGPAAVVGLGPAPQRPQPRQIEMAVYLALHHQGVTVDRFTDDLWPDGNPPTPGGRRVAISRLRSWLGNDPETGEAFVPNRESGYYITDRLLDSDLFTRLVHRSDRRTHAGDVREALSDLQRALALVRGPILPEAGGHEYAWLAAADRLEDRTLPVAVVDAAHFATDLALAMGDSDAAESAAMVGRSVQPYSLIPLCDLIRVAQYCGDGETAAAWARATLDAADADVPAELPEHVRDHVAAALAGSSRDRLTTGARQ*