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SCN18_10_11_15_R5_P_scaffold_3

Search features with annotation key words

Displaying items 91-120 of 835 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R5_P_scaffold_3_91
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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104501..106042
DNA (1542bp) protein (514aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI0003697D24
peptidase M48 Ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:ACK82415.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
SCN18_10_11_15_R5_P_scaffold_3_92
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(106063..106806)
DNA (744bp) protein (248aa)
Transcriptional regulator n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HAN3_9PROT
Transcriptional regulator {ECO:0000313|EMBL:EKV27623.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
GntR family transcriptional regulator
SCN18_10_11_15_R5_P_scaffold_3_93
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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106939..107742
DNA (804bp) protein (268aa)
Probable enoyl CoA hydratase id=4885152 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
SCN18_10_11_15_R5_P_scaffold_3_94
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107756..108913
DNA (1158bp) protein (386aa)
Propanoyl-CoA C-acyltransferase id=4885150 bin=GWC2_Methylomirabilis_70_16 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
SCN18_10_11_15_R5_P_scaffold_3_95
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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108918..109334
DNA (417bp) protein (139aa)
Putative uncharacterized protein id=4885148 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
SCN18_10_11_15_R5_P_scaffold_3_96
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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109385..110737
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Rhodococcus RepID=UPI00036ECACF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_10_11_15_R5_P_scaffold_3_97
unknown

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110734..110973
DNA (240bp) protein (80aa)

This feature has no annotations

SCN18_10_11_15_R5_P_scaffold_3_98
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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110915..111688
DNA (774bp) protein (258aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Micromonospora sp. (strain L5) RepID=E8RWN1_MICSL
short-chain dehydrogenase/reductase sdr
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:EWM67892.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
SCN18_10_11_15_R5_P_scaffold_3_99
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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111685..112458
DNA (774bp) protein (258aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:GAO53545.1}; EC=1.1.1.100 {ECO:0000313|EMBL:GAO53545.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
3-oxoacyl-ACP reductase (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG86_9BRAD
SCN18_10_11_15_R5_P_scaffold_3_100
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112455..113486
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PRE4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH97499.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phosphotransferase enzyme family protein 2
SCN18_10_11_15_R5_P_scaffold_3_101
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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113483..114334
DNA (852bp) protein (284aa)
Putative inner-membrane translocator n=1 Tax=Burkholderia sp. NCIMB 10467 RepID=A8V9E6_9BURK
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIB15925.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCN18_10_11_15_R5_P_scaffold_3_102
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114331..115335
DNA (1005bp) protein (335aa)
Putative inner-membrane translocator n=1 Tax=Burkholderia sp. NCIMB 10467 RepID=A8V9E7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KJR63336.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
ABC transporter permease
SCN18_10_11_15_R5_P_scaffold_3_103
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115332..116036
DNA (705bp) protein (235aa)
ABC transporter-like protein n=1 Tax=Halomonas sp. HAL1 RepID=G4FCD2_9GAMM
ABC transporter
ABC transporter {ECO:0000313|EMBL:AIB15927.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCN18_10_11_15_R5_P_scaffold_3_104
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116033..116728
DNA (696bp) protein (232aa)
Branched-chain amino acid ABC transporter system, substrate-binding protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q5W5_9RHOO
histidinol dehydrogenase
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
SCN18_10_11_15_R5_P_scaffold_3_105
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116768..117952
DNA (1185bp) protein (395aa)
Extracellular ligand-binding receptor n=1 Tax=Halomonas sp. HAL1 RepID=G4FCD0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJR63337.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
SCN18_10_11_15_R5_P_scaffold_3_106
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118109..119110
DNA (1002bp) protein (334aa)
Luciferase family protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U844_METS4
Alkane 1-monooxygenase {ECO:0000313|EMBL:KJB97244.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
luciferase family protein
SCN18_10_11_15_R5_P_scaffold_3_107
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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119165..119503
DNA (339bp) protein (113aa)
Addiction module killer protein id=4177896 bin=GWC2_Methylomirabilis_70_16 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
addiction module antitoxin RelB
Tax=GWC2_Rokubacteria_70_16_curated
SCN18_10_11_15_R5_P_scaffold_3_108
SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_363, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119484..119810
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TJ81_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK52819.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCN18_10_11_15_R5_P_scaffold_3_109
SCNPILOT_CONT_750_BF_Plasmid_63_7, SCNPILOT_CONT_750_BF_Plasmid_63_7, SCNPILOT_CONT_750_BF_Plasmid_63_7, SCNPILOT_CONT_750_BF_Plasmid_63_7, SCNPILOT_CONT_750_BF_Plasmid_63_7, Plasmid-like

Not on your lists

119824..120081
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FAZ7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV14412.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCN18_10_11_15_R5_P_scaffold_3_110
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(120086..121573)
DNA (1488bp) protein (496aa)
AMP-dependent synthetase and ligase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ILL5_METNO
Malonyl-CoA synthase {ECO:0000313|EMBL:KJB93625.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
malonyl-CoA synthase
SCN18_10_11_15_R5_P_scaffold_3_111
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121579..122889)
DNA (1311bp) protein (437aa)
Malonyl-CoA decarboxylase (MCD) (EC:4.1.1.9)
Malonyl-CoA decarboxylase (MCD) n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4INL5_RHIML
MCD, Malonyl-CoA decarboxylase MCD {ECO:0000313|EMBL:KJB93624.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
SCN18_10_11_15_R5_P_scaffold_3_112
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122886..124235)
DNA (1350bp) protein (450aa)
C4-dicarboxylate transport n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IHN6_AZOC5
dctM; C4-dicarboxylate transport
C4-dicarboxylate transport {ECO:0000313|EMBL:BAF89299.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_10_11_15_R5_P_scaffold_3_113
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124232..124789)
DNA (558bp) protein (186aa)
C4-dicarboxylate transport n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IHN3_AZOC5
dctQ; C4-dicarboxylate transport
C4-dicarboxylate transport {ECO:0000313|EMBL:BAF89298.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_10_11_15_R5_P_scaffold_3_114
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124786..125817)
DNA (1032bp) protein (344aa)
Twin-arginine translocation pathway signal n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IHN1_AZOC5
twin-arginine translocation pathway signal
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:BAF89297.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_10_11_15_R5_P_scaffold_3_115
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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125904..126602
DNA (699bp) protein (233aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXS1_9RHIZ
AsnC family transcriptional regulator {ECO:0000313|EMBL:KJB93623.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative GntR, transcriptional regulator GntR
SCN18_10_11_15_R5_P_scaffold_3_116
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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126655..127284
DNA (630bp) protein (210aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RCA1_9RHOO
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EGK71681.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
putative Glycerol metabolism activator
SCN18_10_11_15_R5_P_scaffold_3_117
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127281..128864)
DNA (1584bp) protein (528aa)
CstS1 n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z3T0_9SPHN
CstS1 {ECO:0000313|EMBL:EGD60746.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
complex hybrid signal transduction protein
SCN18_10_11_15_R5_P_scaffold_3_118
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128897..129211)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM41(2012) RepID=J3FSE9_9PSED
NIPSNAP family containing protein {ECO:0000313|EMBL:EUB75310.1}; TaxID=1144708 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM41(2012).;"
hypothetical protein
SCN18_10_11_15_R5_P_scaffold_3_119
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129213..130214)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Pseudomonas sp. 313 RepID=UPI0002D479D4
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:KIZ48663.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryzihabitans.;"
2OG-Fe(II) oxygenase
SCN18_10_11_15_R5_P_scaffold_3_120
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130234..131232)
DNA (999bp) protein (333aa)
ABC transporter, substrate-binding component n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHB7_AZOL4
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWY41414.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
ABC transporter, substrate-binding component
Displaying items 91-120 of 835 in total

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