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SCN18_10_11_15_R4_P_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 294 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_P_scaffold_50_1
Pseudomonas entomophila, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(261..1538)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Pseudomonas entomophila (strain L48) RepID=Q1IAE6_PSEE4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAK15373.1}; TaxID=384676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas entomophila (strain L48).;"
SCN18_10_11_15_R4_P_scaffold_50_2
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1626..2570
DNA (945bp) protein (315aa)
TRAP transporter solute receptor, TAXI family n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WCU9_9BRAD
immunogenic protein precursor
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_50_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2760..3149)
DNA (390bp) protein (130aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_50_4
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3206..3496)
DNA (291bp) protein (97aa)
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=PHS_PARL1
transcriptional coactivator/pterin dehydratase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_50_5
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3577..5103
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000361E97E
peptide/nickel transport system substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_50_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5247..6380)
DNA (1134bp) protein (378aa)
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3HZD7_9BRAD
salicylate 1-monooxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_50_7
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6377..7303)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000372F7A6
appF; oligopeptide transport ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_50_8
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7314..8264)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035D047F
peptide/nickel transport system ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_50_9
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8261..9097)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000374F3D2
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACL58564.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_10_11_15_R4_P_scaffold_50_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9094..10011)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000380A0AB
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_50_11
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10135..10584
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00037FC04B
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_50_12
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11264..11776)
DNA (513bp) protein (171aa)
Isrso18-transposase protein n=1 Tax=Ralstonia solanacearum (strain GMI1000) RepID=Q8XYQ4_RALSO
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:AEF88789.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCN18_10_11_15_R4_P_scaffold_50_13
unknown

Not on your lists

comp(12195..12398)
DNA (204bp) protein (68aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_50_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12395..13147)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IZK2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB15129.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
putative transmembrane protein
SCN18_10_11_15_R4_P_scaffold_50_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13236..14153
DNA (918bp) protein (306aa)
Transcriptional regulator n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BH60_9RHIZ
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGK59781.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_10_11_15_R4_P_scaffold_50_16
unknown

Not on your lists

comp(14157..14489)
DNA (333bp) protein (111aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_50_17
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14486..14839)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVW1_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD07649.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCN18_10_11_15_R4_P_scaffold_50_18
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14853..15305)
DNA (453bp) protein (151aa)
Putative fluoride ion transporter CrcB n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HPZ8_9SPHN
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
crcB protein
SCN18_10_11_15_R4_P_scaffold_50_19
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15302..15718)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000373FDED
camphor resistance protein CrcB
Putative fluoride ion transporter CrcB 2 {ECO:0000255|HAMAP-Rule:MF_00454}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_10_11_15_R4_P_scaffold_50_20
unknown

Not on your lists

comp(15720..16016)
DNA (297bp) protein (99aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_50_21
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16053..17267)
DNA (1215bp) protein (405aa)
Glutathione-regulated potassium-proton antiporter n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HMZ9_PSEUO
potassium transporter Kef
Potassium transporter Kef {ECO:0000313|EMBL:AJF00196.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCN18_10_11_15_R4_P_scaffold_50_22
unknown

Not on your lists

comp(17411..17581)
DNA (171bp) protein (57aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_50_23
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17987..19381)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JEL0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ESJ26386.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_50_24
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19378..19923)
DNA (546bp) protein (182aa)
Uracil-DNA glycosylase superfamily n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FTH8_PHAMO
G:T/U mismatch-specific DNA glycosylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_50_25
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19898..20866)
DNA (969bp) protein (323aa)
Putative Bug-like extra-cytoplasmic solute receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1XM52_VARPD
Uncharacterized protein {ECO:0000313|EMBL:KFG69043.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_50_26
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20930..22084
DNA (1155bp) protein (385aa)
Butyryl-CoA dehydrogenase n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KTZ3_9GAMM
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CEJ10559.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
acyl-CoA dehydrogenase
SCN18_10_11_15_R4_P_scaffold_50_27
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22081..23220
DNA (1140bp) protein (380aa)
CaiB/baiF CoA-transferase family protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GUH8_CUPNN
Formyl-coenzyme A transferase {ECO:0000313|EMBL:CEJ10558.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
CaiB/baiF CoA-transferase family protein
SCN18_10_11_15_R4_P_scaffold_50_28
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23217..24332
DNA (1116bp) protein (372aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Glaciecola mesophila KMM 241 RepID=K6Z2V9_9ALTE
Formyl-coenzyme A transferase {ECO:0000313|EMBL:CEJ10557.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCN18_10_11_15_R4_P_scaffold_50_29
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24329..25954
DNA (1626bp) protein (542aa)
Amidohydrolase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U9S7_METS4
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ACA19022.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCN18_10_11_15_R4_P_scaffold_50_30
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25951..26964
DNA (1014bp) protein (338aa)
cobalamin biosynthesis protein CobW n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000382F31C
cobalamin synthesis protein P47K
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:ACA19023.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
Displaying items 1-30 of 294 in total

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