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SCN18_10_11_15_R4_P_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 239 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_P_scaffold_67_1
unknown

Not on your lists

393..713
DNA (321bp) protein (107aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_67_2
SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27, SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(831..1604)
DNA (774bp) protein (258aa)
Pentapeptide repeat protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VL72_RHOPX
pentapeptide repeat-containing protein
Pentapeptide repeat protein {ECO:0000313|EMBL:ADU44567.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCN18_10_11_15_R4_P_scaffold_67_3
unknown

Not on your lists

comp(1830..1988)
DNA (159bp) protein (53aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_67_4
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2015..2605)
DNA (591bp) protein (197aa)
Putative internal virion protein n=1 Tax=Rhizobium phage RHEph01 RepID=L7TMN3_9CAUD
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN56521.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCN18_10_11_15_R4_P_scaffold_67_5
unknown

Not on your lists

comp(2598..2933)
DNA (336bp) protein (112aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_67_6
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2950..3906)
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2VZX1_MAGSA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE52854.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
SCN18_10_11_15_R4_P_scaffold_67_7
unknown

Not on your lists

comp(3903..4748)
DNA (846bp) protein (282aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_67_8
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4845..6785)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UDP5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11616.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
SCN18_10_11_15_R4_P_scaffold_67_9
unknown

Not on your lists

comp(6806..7153)
DNA (348bp) protein (116aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_67_10
unknown

Not on your lists

7677..7865
DNA (189bp) protein (63aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_67_11
unknown

Not on your lists

8385..8903
DNA (519bp) protein (173aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_67_12
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8892..9587)
DNA (696bp) protein (232aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Novosphingobium sp. AP12 RepID=J2Q532_9SPHN
Site-specific recombinase, DNA invertase Pin {ECO:0000313|EMBL:EJL35297.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
Resolvase, N-terminal
SCN18_10_11_15_R4_P_scaffold_67_13
unknown

Not on your lists

9746..9943
DNA (198bp) protein (66aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_67_14
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10134..11216)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVM1_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS63954.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_10_11_15_R4_P_scaffold_67_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11303..12541)
DNA (1239bp) protein (413aa)
Integrase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SAB8_PHAFV
Integrase {ECO:0000313|EMBL:EPY01624.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
integrase
SCN18_10_11_15_R4_P_scaffold_67_16
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(12749..13144)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035DE936
Uncharacterized protein {ECO:0000313|EMBL:ETW93587.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PduO protein
SCN18_10_11_15_R4_P_scaffold_67_17
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13171..14307)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QMG2_BORBO
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCN18_10_11_15_R4_P_scaffold_67_18
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14776..15411
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. AA4 RepID=D9V5H9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGM31336.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_67_19
unknown

Not on your lists

15408..15983
DNA (576bp) protein (192aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_67_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15991..16881)
DNA (891bp) protein (297aa)
Lipase/esterase n=1 Tax=uncultured bacterium RepID=Q6RJM1_9BACT
Lipase/esterase {ECO:0000313|EMBL:AAS77236.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Alpha/beta hydrolase fold-3 domain-containing protein
SCN18_10_11_15_R4_P_scaffold_67_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16946..17848
DNA (903bp) protein (301aa)
lipase LipH (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1CRS3_EMIHU
Putative esterase/lipase {ECO:0000313|EMBL:AHZ45676.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCN18_10_11_15_R4_P_scaffold_67_22
unknown

Not on your lists

comp(17932..18114)
DNA (183bp) protein (61aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_67_23
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18375..18854
DNA (480bp) protein (160aa)
flavin reductase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000361272A
Flavin reductase {ECO:0000313|EMBL:ETR75652.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
flavin reductase
SCN18_10_11_15_R4_P_scaffold_67_24
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18858..19988)
DNA (1131bp) protein (377aa)
Permease n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJZ1_9PROT
major facilitator superfamily MFS_1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_67_25
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20137..20910
DNA (774bp) protein (258aa)
gamma-glutamyl-gamma-aminobutyrate hydrolase (EC:3.5.1.94)
Gamma-glutamyl-gamma-aminobutyrate hydrolase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VKD5_RHOPX
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_67_26
Acinetobacter sp. NIPH 809_SCNpilot_P_inoc_Acinetobacter_41_9_partial, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20907..22232
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003016028
nitrilotriacetate monooxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_67_27
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22223..22972
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U1B1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP61851.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
short-chain dehydrogenase/reductase SDR
SCN18_10_11_15_R4_P_scaffold_67_28
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22992..24047
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000315EB83
Uncharacterized protein {ECO:0000313|EMBL:ETW95779.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
amidohydrolase 2
SCN18_10_11_15_R4_P_scaffold_67_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24137..24751
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z185_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_67_30
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25104..26492)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037D0FC0
Amidase {ECO:0000313|EMBL:ETR76739.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
Amidase
Displaying items 1-30 of 239 in total

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