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SCN18_30_10_14_R3_B_scaffold_3847

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_B_scaffold_3847_1
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20..1543
DNA (1524bp) protein (508aa)
narH; respiratory nitrate reductase beta chain NarH (EC:1.7.99.4)
Nitrate reductase, beta subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3B3_9BRAD
Nitrate reductase, beta subunit {ECO:0000313|EMBL:EFI52443.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCN18_30_10_14_R3_B_scaffold_3847_2
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1540..2244
DNA (705bp) protein (235aa)
Nitrate reductase molybdenum cofactor assembly chaperone n=1 Tax=Afipia felis ATCC 53690 RepID=K8NXR3_AFIFE
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:EKS30993.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
narJ; nitrate reductase molybdenum cofactor assembly chaperone
SCN18_30_10_14_R3_B_scaffold_3847_3
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2258..3004
DNA (747bp) protein (249aa)
narI; respiratory nitrate reductase gamma chain NarI (EC:1.7.99.4)
Respiratory nitrate reductase gamma chain NarI {ECO:0000313|EMBL:AEI07604.1}; EC=1.7.99.4 {ECO:0000313|EMBL:AEI07604.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Respiratory nitrate reductase gamma chain NarI n=2 Tax=Oligotropha carboxidovorans RepID=B6JBW5_OLICO
SCN18_30_10_14_R3_B_scaffold_3847_4
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3016..3840
DNA (825bp) protein (275aa)
Peptidyl-prolyl cis-trans isomerase domain protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JBW6_OLICO
peptidyl-prolyl cis-trans isomerase domain protein
Peptidyl-prolyl cis-trans isomerase domain protein {ECO:0000313|EMBL:AEI07603.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_3847_5
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3850..4194
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPD2_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30996.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_3847_6
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4191..4763
DNA (573bp) protein (191aa)
molybdenum cofactor biosynthesis protein MogA n=1 Tax=Afipia birgiae RepID=UPI000303AFB9
molybdopterin biosynthesis mog protein
Molybdopterin adenylyltransferase Mog {ECO:0000313|EMBL:AEI07601.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_3847_7
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4732..5319
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030DCB45
Uncharacterized protein {ECO:0000313|EMBL:EFI52437.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
3-dehydroquinate dehydratase
SCN18_30_10_14_R3_B_scaffold_3847_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5421..5837)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKT4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM24576.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
protein of unassigned function
SCN18_30_10_14_R3_B_scaffold_3847_9
unknown

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6044..6181
DNA (138bp) protein (46aa)

This feature has no annotations

SCN18_30_10_14_R3_B_scaffold_3847_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6506..6877)
DNA (372bp) protein (124aa)
Nitrogen fixation regulation protein FixK, Crp/Fnr family n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZBR7_9BRAD
fixK; nitrogen fixation regulation protein FixK, Crp/Fnr family
Nitrogen fixation regulation protein FixK, Crp/Fnr family {ECO:0000313|EMBL:BAM91152.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
Displaying 10 items

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