name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_30_10_14_R3_B_scaffold_1728_1
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2..592)
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anti-sigma factor n=1 Tax=Afipia birgiae RepID=UPI0002D9C19B
Uncharacterized protein {ECO:0000313|EMBL:EGP08552.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
anti-sigma factor
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SCN18_30_10_14_R3_B_scaffold_1728_2
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(657..1226)
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RNA polymerase sigma factor n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKM2_9BRAD
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
sigma-24 (FecI-like)
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SCN18_30_10_14_R3_B_scaffold_1728_3
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1367..2188
|
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
enoyl-ACP reductase (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRU5_AFIFE
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SCN18_30_10_14_R3_B_scaffold_1728_4
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2310..2909
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PP75_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41295.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
phosphoglycerate mutase
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SCN18_30_10_14_R3_B_scaffold_1728_5
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
3132..4217
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Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
aroC; chorismate synthase AroC (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXF3_9BRAD
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SCN18_30_10_14_R3_B_scaffold_1728_6
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
4554..6314
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Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P105_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32118.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
chloride channel protein
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SCN18_30_10_14_R3_B_scaffold_1728_7
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
6425..7060
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Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9B6_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEG08840.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
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SCN18_30_10_14_R3_B_scaffold_1728_8
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7150..8832)
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Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSI2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41303.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
chemotaxis sensory transducer
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SCN18_30_10_14_R3_B_scaffold_1728_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
9153..9986
|
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QJ55_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE99936.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
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SCN18_30_10_14_R3_B_scaffold_1728_10
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(10188..11429)
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Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NP31_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32122.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative RNA methyltransferase
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SCN18_30_10_14_R3_B_scaffold_1728_11
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(11550..12281)
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rrmJ; ribosomal RNA large subunit methyltransferase J (EC:2.1.1.-)
hemolysin n=1 Tax=Afipia birgiae RepID=UPI00031374DC
Hemolysin TlyA family protein {ECO:0000313|EMBL:EKS41306.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
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SCN18_30_10_14_R3_B_scaffold_1728_12
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(12500..14416)
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1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
dxs1; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Bradyrhizobiaceae RepID=F7QJV3_9BRAD
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SCN18_30_10_14_R3_B_scaffold_1728_13
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(14595..14846)
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exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000255|HAMAP-Rule:MF_00337}; EC=3.1.11.6 {ECO:0000255|HAMAP-Rule:MF_00337};; Exodeoxyribonuclease VII small subunit {ECO:0000255|HAMAP-Rule:MF_00337}; Short=Exonuclease VII small subunit {ECO:0000255|HAMAP-Rule:MF_00337};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=EX7S_NITHX
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SCN18_30_10_14_R3_B_scaffold_1728_14
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(15011..15817)
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Histone deacetylase family protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JFI2_OLICO
histone deacetylase family protein
Histone deacetylase family protein {ECO:0000313|EMBL:AEI05906.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
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