ggKbase home page

SCN18_30_10_14_R3_B_scaffold_2885

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_B_scaffold_2885_1
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..741
DNA (741bp) protein (247aa)
penicillin-binding protein 1A (EC:2.4.2.- 3.4.-.-)
1A family penicillin-binding protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NCW8_AFIFE
1A family penicillin-binding protein {ECO:0000313|EMBL:EKS28452.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCN18_30_10_14_R3_B_scaffold_2885_2
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

993..1961
DNA (969bp) protein (323aa)
Peptide chain release factor 2 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHB3_AFIFE
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
peptide chain release factor 2
SCN18_30_10_14_R3_B_scaffold_2885_3
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1979..3337)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDU0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39721.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
peptidase M23B
SCN18_30_10_14_R3_B_scaffold_2885_4
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3439..3984)
DNA (546bp) protein (182aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Malallergen n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZ66_9BRAD
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Malallergen {ECO:0000313|EMBL:EAQ34723.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
alkyl hydroperoxide reductase
SCN18_30_10_14_R3_B_scaffold_2885_5
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4290..7892
DNA (3603bp) protein (1201aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V670_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI51817.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_2885_6
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7911..9011)
DNA (1101bp) protein (367aa)
tyrS; tyrosine-tRNA ligase TyrS (EC:6.1.1.1)
Tyrosine-tRNA ligase TyrS {ECO:0000313|EMBL:AEI06737.1}; EC=6.1.1.1 {ECO:0000313|EMBL:AEI06737.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Tyrosine--tRNA ligase n=2 Tax=Oligotropha carboxidovorans RepID=B6JHE4_OLICO
Displaying 6 items

View Taxonomy