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SCN18_30_10_14_R3_B_scaffold_4313

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_B_scaffold_4313_1
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..245
DNA (243bp) protein (81aa)
Peroxiredoxin, Ohr subfamily n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNF7_AFIFE
Peroxiredoxin, Ohr subfamily {ECO:0000313|EMBL:EKS29949.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
OsmC-like protein
SCN18_30_10_14_R3_B_scaffold_4313_2
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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267..1697
DNA (1431bp) protein (477aa)
atpD; F0F1 ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
ATP synthase subunit beta n=2 Tax=Oligotropha carboxidovorans RepID=ATPB_OLICO
SCN18_30_10_14_R3_B_scaffold_4313_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1833..2243
DNA (411bp) protein (137aa)
ATP synthase epsilon chain n=2 Tax=Oligotropha carboxidovorans RepID=ATPE_OLICO
atpC; ATP synthase subunit epsilon
ATP synthase epsilon chain {ECO:0000255|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000255|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000255|HAMAP-Rule:MF_00530}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_4313_4
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2636..3136)
DNA (501bp) protein (167aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
dinucleoside polyphosphate hydrolase (EC:3.6.1.-)
RNA pyrophosphohydrolase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLE9_AFIFE
SCN18_30_10_14_R3_B_scaffold_4313_5
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3293..4474)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAZ1_9BRAD
Divergent polysaccharide deacetylase {ECO:0000313|EMBL:CEG09746.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_4313_6
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4549..5103)
DNA (555bp) protein (185aa)
maltose O-acetyltransferase Maa (EC:2.3.1.79)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNF3_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29944.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCN18_30_10_14_R3_B_scaffold_4313_7
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5227..6261)
DNA (1035bp) protein (345aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:EGP09637.1}; EC=3.4.21.102 {ECO:0000313|EMBL:EGP09637.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Carboxyl-terminal protease n=2 Tax=Bradyrhizobiaceae RepID=F7QH31_9BRAD
ctpA; carboxy-terminal protease
Displaying 7 items

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