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SCN18_30_10_14_R3_B_scaffold_805_3

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(1276..1767)

Top 3 Functional Annotations

Value Algorithm Source
Single-stranded DNA-binding protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6R7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 163.0
  • Bit_score: 295
  • Evalue 3.10e-77
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 163.0
  • Bit_score: 295
  • Evalue 4.40e-77
single-stranded DNA-binding protein (SSB) similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 163.0
  • Bit_score: 286
  • Evalue 3.10e-75

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGGCGGGAAGCGTTAACAAGGTGATTTTGGTCGGCAACCTCGGCGCCGATCCCGACATGCGCCGGACCCAGGACGGCCGTCCGATCGCCAATCTCAGCGTCGCGACCTCGGAGAGCTGGCGCGACAAGAATACCGGCGAGCGCAAGGAAAAGACCGAGTGGCACCGCGTGGTGATCTTCAATGAAGGGTTGTGCCGGATCGCCGAGCAGTATCTGAAGAAGGGCTCCAAGGTTTACATCGAGGGCGCGCTGCAGACTCGCAAATGGCAGGACAAGGACGGCAAGGACAAGTATTCGACCGAAGTGGTGCTGCAGGGCTTCAACTCGGTTCTCACCATGCTGGACGGCCGTAGCGGCGGTGGCGGCGGATCGTTCGCGTCCGACGATACTGGCGGCGATTTTGTCTCCGGCGGCGGTTCGCAGCGCCGGTCGGTCTCGTCGGGCGGCGGCGGTGGCCGCAACGACGACATGAACGACGATATTCCGTTTTAA
PROTEIN sequence
Length: 164
MAGSVNKVILVGNLGADPDMRRTQDGRPIANLSVATSESWRDKNTGERKEKTEWHRVVIFNEGLCRIAEQYLKKGSKVYIEGALQTRKWQDKDGKDKYSTEVVLQGFNSVLTMLDGRSGGGGGSFASDDTGGDFVSGGGSQRRSVSSGGGGGRNDDMNDDIPF*