ggKbase home page

SCN18_30_10_14_R3_B_scaffold_814_28

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 31327..31692

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBH3_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 121.0
  • Bit_score: 234
  • Evalue 4.80e-59
dksA; DnaK suppressor protein DksA similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 121.0
  • Bit_score: 234
  • Evalue 1.40e-59
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 121.0
  • Bit_score: 234
  • Evalue 6.80e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGAACGAGCGGCAGCGCGAATACTTTCGTGAGAAGCTGCTCGCCTGGAAAGACGAGATCCTGCGCGAGGCGAAGATGACGCTTCAGCAGCTCCAGGAGGAAAACGTCAATCATCCCGATCTGGCTGATCGCGCCTCGTCGGAAACCGACCGCGCAATCGAACTGCGCGCGCGCGATCGTCAGCGCAAGCTGATTTCCAAGATCGACGCCGCGATCCAGCGCATCGAAGACAACACCTACGGCTATTGCGAAGAGACCGGCGAGCCGATTTCCTTGAAGCGGCTCGAGGCACGGCCGATCGCGACGCTGTCGGTCGAGGCGCAGGAGCGCCACGAGAAGCGCGAGAAGGTCTATCGCGACGAATAG
PROTEIN sequence
Length: 122
MNERQREYFREKLLAWKDEILREAKMTLQQLQEENVNHPDLADRASSETDRAIELRARDRQRKLISKIDAAIQRIEDNTYGYCEETGEPISLKRLEARPIATLSVEAQERHEKREKVYRDE*