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SCN18_30_10_14_R3_B_scaffold_814

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_B_scaffold_814_1
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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74..940
DNA (867bp) protein (289aa)
Putative ABC transporter n=2 Tax=Oligotropha carboxidovorans RepID=B6JBE4_OLICO
putative ABC transporter substrate-binding protein
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:AEI07319.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_814_2
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

915..1895
DNA (981bp) protein (327aa)
glk; glucokinase (EC:2.7.1.2)
Glucokinase Glk {ECO:0000313|EMBL:AEI07318.1}; EC=2.7.1.2 {ECO:0000313|EMBL:AEI07318.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Glucokinase n=2 Tax=Oligotropha carboxidovorans RepID=B6JBE5_OLICO
SCN18_30_10_14_R3_B_scaffold_814_3
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2002..6807)
DNA (4806bp) protein (1602aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4D9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36346.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_814_4
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7174..7557
DNA (384bp) protein (128aa)
Hpt domain-containing protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQE1_9BRAD
Hpt domain-containing protein {ECO:0000313|EMBL:EGP06555.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
two-component hybrid sensor and regulator
SCN18_30_10_14_R3_B_scaffold_814_5
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7653..7973
DNA (321bp) protein (107aa)
Ferredoxin n=2 Tax=Bradyrhizobiaceae RepID=F7QQE0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37845.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ferredoxin, adrenodoxin
SCN18_30_10_14_R3_B_scaffold_814_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8204..9232
DNA (1029bp) protein (343aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Ferredoxin--NADP reductase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P178_9BRAD
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
SCN18_30_10_14_R3_B_scaffold_814_7
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9330..9881)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DDQ8_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KJC38155.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_814_8
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9960..11924)
DNA (1965bp) protein (655aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JBF0_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07313.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_814_9
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12021..13076)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2H1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52151.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_814_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13457..13963
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NGH8_AFIFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS27534.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCN18_30_10_14_R3_B_scaffold_814_11
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14017..14451)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NIY6_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27535.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_814_12
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14547..15077)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NF14_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27536.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
phosphoglycerate mutase
SCN18_30_10_14_R3_B_scaffold_814_13
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15180..16619
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NA89_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27537.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
FAD dependent oxidoreductase
SCN18_30_10_14_R3_B_scaffold_814_14
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16729..17232
DNA (504bp) protein (168aa)
Peptide methionine sulfoxide reductase msrB {ECO:0000313|EMBL:CCE07861.1}; EC=1.8.4.11 {ECO:0000313|EMBL:CCE07861.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
msrB; methionine-R-sulfoxide reductase (EC:1.8.4.-)
Peptide methionine sulfoxide reductase msrB n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TN23_9BRAD
SCN18_30_10_14_R3_B_scaffold_814_15
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17406..19226
DNA (1821bp) protein (607aa)
Fagellar hook-basal body protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2G1_9BRAD
Fagellar hook-basal body protein {ECO:0000313|EMBL:EFI52141.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
flgE; flagellar hook protein FlgE
SCN18_30_10_14_R3_B_scaffold_814_16
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19271..21145
DNA (1875bp) protein (625aa)
Flagellar hook-associated protein FlgK n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P168_9BRAD
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:EKS36327.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
flgK; flagellar hook-associated protein FlgK
SCN18_30_10_14_R3_B_scaffold_814_17
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21157..22671
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NF20_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27541.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_814_18
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22779..23213)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NA92_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27542.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
flbT; flagellum biosynthesis repressor protein FlbT
SCN18_30_10_14_R3_B_scaffold_814_19
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23536..25131
DNA (1596bp) protein (532aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3STM5_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA04366.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCN18_30_10_14_R3_B_scaffold_814_20
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25389..26948
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031E9250
Uncharacterized protein {ECO:0000313|EMBL:EKS36323.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
flagellar protein
SCN18_30_10_14_R3_B_scaffold_814_21
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27095..27460
DNA (366bp) protein (122aa)
Flagellar FlaF n=2 Tax=Oligotropha carboxidovorans RepID=B6JBG6_OLICO
flaF; flagellar biosynthesis regulatory protein FlaF
Putative flagellar protein FlaF {ECO:0000313|EMBL:AEI07298.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_814_22
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27481..27846
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NF23_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27546.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_814_23
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27856..28218)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2F3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07404.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_814_24
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28400..28888)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDC1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36318.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_814_25
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28908..29258)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P159_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36317.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
chemotactic signal-response protein CheL
SCN18_30_10_14_R3_B_scaffold_814_26
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29258..30367)
DNA (1110bp) protein (370aa)
Flagellar P-ring protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JBH1_OLICO
flgI; flagellar P-ring protein FlgI
Flagellar P-ring protein FlgI {ECO:0000313|EMBL:AEI07293.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_814_27
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30686..31093
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9Q0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36315.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
fliX; flagellar assembly regulator FliX
SCN18_30_10_14_R3_B_scaffold_814_28
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31327..31692
DNA (366bp) protein (122aa)
RNA polymerase-binding transcription factor DksA n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBH3_OLICO
dksA; DnaK suppressor protein DksA
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCN18_30_10_14_R3_B_scaffold_814_29
Rhodanobacter spathiphylli_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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31759..32616
DNA (858bp) protein (286aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099};; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
beta-lactamase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003810058
bla; beta-lactamase L2
SCN18_30_10_14_R3_B_scaffold_814_30
unknown

Not on your lists

32714..32842
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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