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SCN18_30_10_14_R3_P_scaffold_1365

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_P_scaffold_1365_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(523..2901)
DNA (2379bp) protein (793aa)
Uncharacterized protein n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28N97_JANSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD55815.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (strain CCS1).;"
SCN18_30_10_14_R3_P_scaffold_1365_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2898..3095)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4NUJ2_9CAUL
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AJE46146.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
SCN18_30_10_14_R3_P_scaffold_1365_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3180..3758)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28N96_JANSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD55816.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (strain CCS1).;"
SCN18_30_10_14_R3_P_scaffold_1365_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3898..4518
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUH3_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA04068.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCN18_30_10_14_R3_P_scaffold_1365_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5260..5994)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G6J5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EMS80101.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source="Desulfotignum phosphitoxidans DSM 13687.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_1365_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6327..6980
DNA (654bp) protein (218aa)
transcriptional regulator n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A895EF
Transcriptional regulator {ECO:0000313|EMBL:GAM65297.1}; TaxID=1481922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. JCM 19232.;"
DNA-binding transcriptional regulator
SCN18_30_10_14_R3_P_scaffold_1365_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7109..8380)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CF65_9RHOB
FAD dependent oxidoreductase {ECO:0000313|EMBL:CDX33728.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_1365_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8461..9168)
DNA (708bp) protein (236aa)
amino acid ABC transporter ATPase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000368CCB4
ABC transporter ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R3_P_scaffold_1365_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9155..10918)
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DQD2_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL11653.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCN18_30_10_14_R3_P_scaffold_1365_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10921..11865)
DNA (945bp) protein (315aa)
branched-chain amino acid ABC transporter permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003731B47
hypothetical protein
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KGT78539.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
SCN18_30_10_14_R3_P_scaffold_1365_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11939..13183)
DNA (1245bp) protein (415aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036256E6
putative branched-chain amino acid ABC transporter
Putative branched-chain amino acid ABC transporter {ECO:0000313|EMBL:BAL75203.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_30_10_14_R3_P_scaffold_1365_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13223..14176)
DNA (954bp) protein (318aa)
Microsomal dipeptidase {ECO:0000313|EMBL:ESR22529.1}; EC=3.4.13.19 {ECO:0000313|EMBL:ESR22529.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
Microsomal dipeptidase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RAV3_9RHIZ
membrane dipeptidase
SCN18_30_10_14_R3_P_scaffold_1365_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14626..14844
DNA (219bp) protein (73aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
dihydrodipicolinate reductase n=1 Tax=Xanthobacteraceae RepID=UPI000370E117
SCN18_30_10_14_R3_P_scaffold_1365_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14914..15741)
DNA (828bp) protein (276aa)
integrase n=1 Tax=Aureimonas ureilytica RepID=UPI000378E879
Integrase catalytic region {ECO:0000313|EMBL:EHP72637.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
integrase catalytic subunit
SCN18_30_10_14_R3_P_scaffold_1365_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15816..16094)
DNA (279bp) protein (93aa)
Transposase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YX79_9RHIZ
Transposase {ECO:0000313|EMBL:EIM28571.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
transposase IS3/IS911 family protein
SCN18_30_10_14_R3_P_scaffold_1365_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16238..16522
DNA (285bp) protein (95aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YT38_9RHIZ
SCN18_30_10_14_R3_P_scaffold_1365_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16834..18009)
DNA (1176bp) protein (392aa)
Phage integrase n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28N95_JANSC
phage integrase
Phage integrase {ECO:0000313|EMBL:ABD55817.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (strain CCS1).;"
SCN18_30_10_14_R3_P_scaffold_1365_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18311..18961
DNA (651bp) protein (217aa)
UPI0003CE27D7 related cluster n=1 Tax=unknown RepID=UPI0003CE27D7
Integrase {ECO:0000313|EMBL:ESY66198.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
xerD1; Tyrosine recombinase xerD
SCN18_30_10_14_R3_P_scaffold_1365_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19015..19107
DNA (93bp) protein (31aa)
Displaying 19 items

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