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SCN18_30_10_14_R3_P_scaffold_1546

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_P_scaffold_1546_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(406..516)
DNA (111bp) protein (37aa)
SCN18_30_10_14_R3_P_scaffold_1546_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(900..2750)
DNA (1851bp) protein (617aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q989T5_RHILO
Putative peptide transporter {ECO:0000313|EMBL:KFC66806.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter ATP-binding protein
SCN18_30_10_14_R3_P_scaffold_1546_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2772..3707)
DNA (936bp) protein (312aa)
Putative oligopeptide transport system permease protein oppC (ABC superfamily, membrane) {ECO:0000313|EMBL:KFC66807.1}; EC=3.6.3.24 {ECO:0000313|EMBL:KFC66807.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UB59_METS4
binding-protein-dependent transport system inner membrane protein
SCN18_30_10_14_R3_P_scaffold_1546_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3673..4632)
DNA (960bp) protein (320aa)
Oligopeptide transport system permease protein (ABC superfamily, OppBC subfamily) {ECO:0000313|EMBL:KFC66808.1}; EC=3.6.3.24 {ECO:0000313|EMBL:KFC66808.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IM10_METNO
binding-protein-dependent transport system inner membrane protein
SCN18_30_10_14_R3_P_scaffold_1546_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4782..6569)
DNA (1788bp) protein (596aa)
Substrate-binding protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G1E7_9BRAD
Substrate-binding protein {ECO:0000313|EMBL:KFC66809.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
substrate-binding protein
SCN18_30_10_14_R3_P_scaffold_1546_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7269..8189
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003817A0F
Uncharacterized protein {ECO:0000313|EMBL:EIM27126.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_1546_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8211..10397
DNA (2187bp) protein (729aa)
Cellulose synthase catalytic subunit (UDP-forming) n=1 Tax=Microvirga sp. WSM3557 RepID=I4YT33_9RHIZ
Cellulose synthase catalytic subunit (UDP-forming) {ECO:0000313|EMBL:EIM27125.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
cellulose synthase catalytic subunit
SCN18_30_10_14_R3_P_scaffold_1546_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10394..12859
DNA (2466bp) protein (822aa)
Bacterial cellulose synthase subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YT32_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG67781.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
cellulose synthase BcsB
SCN18_30_10_14_R3_P_scaffold_1546_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12871..13890
DNA (1020bp) protein (340aa)
cellulase (EC:3.2.1.4)
Cellulase {ECO:0000313|EMBL:ADH90447.1}; EC=3.2.1.4 {ECO:0000313|EMBL:ADH90447.1};; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Cellulase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7Y9_STAND
SCN18_30_10_14_R3_P_scaffold_1546_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13881..16073
DNA (2193bp) protein (731aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003660C23
Uncharacterized protein {ECO:0000313|EMBL:EIM27121.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_1546_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16276..16566
DNA (291bp) protein (97aa)
Probable insertion sequence transposase protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2K2F1_RHIEC
Transposase {ECO:0000313|EMBL:CDX11429.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
insertion sequence transposase
Displaying 11 items

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