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SCN18_30_10_14_R3_P_scaffold_482

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_P_scaffold_482_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

356..697
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQW0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH10360.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_482_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

804..1610
DNA (807bp) protein (269aa)
Metallophosphoesterase n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B4R6_METEA
Metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACS43448.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
SCN18_30_10_14_R3_P_scaffold_482_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1626..3569
DNA (1944bp) protein (648aa)
Cell division protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VQQ8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KJS14052.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
ATPase central domain-containing protein
SCN18_30_10_14_R3_P_scaffold_482_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3576..4580)
DNA (1005bp) protein (335aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
trxB1; thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CDZ7_9RHIZ
SCN18_30_10_14_R3_P_scaffold_482_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4611..4994)
DNA (384bp) protein (128aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
thioredoxin reductase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030DB95C
thioredoxin reductase
SCN18_30_10_14_R3_P_scaffold_482_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5206..6159)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031521BD
Uncharacterized protein {ECO:0000313|EMBL:KFC73943.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_482_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6354..6818
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000366D0E1
Transcriptional regulatory protein {ECO:0000313|EMBL:KFC73942.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
AsnC family transcriptional regulator
SCN18_30_10_14_R3_P_scaffold_482_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6823..7308)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IBN7_METNO
Uncharacterized protein {ECO:0000313|EMBL:KFC73939.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_482_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7313..7780)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI000349B309
Uncharacterized protein {ECO:0000313|EMBL:KFC73940.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_482_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7788..8270)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U8M1_METS4
Uncharacterized protein {ECO:0000313|EMBL:KFC73939.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_482_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8339..8812)
DNA (474bp) protein (158aa)
Transcription elongation factor GreA n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPN3_9RHIZ
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
greA; Transcription elongation factor GreA
SCN18_30_10_14_R3_P_scaffold_482_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8919..12251)
DNA (3333bp) protein (1111aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
carbamoyl phosphate synthase large subunit n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D68881
SCN18_30_10_14_R3_P_scaffold_482_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12672..13880
DNA (1209bp) protein (403aa)
nhaA; Na(+)/H(+) antiporter NhaA (EC:3.4.-.-)
Na(+)/H(+) antiporter NhaA n=1 Tax=Sinorhizobium sp. M14 RepID=R4IL74_9RHIZ
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=430451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium sp. M14.;"
SCN18_30_10_14_R3_P_scaffold_482_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14026..15087
DNA (1062bp) protein (354aa)
Putative methyltransferase n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M6E6_RHIL3
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:CAK03188.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCN18_30_10_14_R3_P_scaffold_482_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15105..16487)
DNA (1383bp) protein (461aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000255|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000255|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000255|HAMAP-Rule:MF_01281};; EC=3.5.4.31 {ECO:0000255|HAMAP-Rule:MF_01281};; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=MTAD_SYMTH
N-ethylammeline chlorohydrolase
SCN18_30_10_14_R3_P_scaffold_482_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16752..17966
DNA (1215bp) protein (405aa)
Cobalamin synthesis protein P47K n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QRX8_METTR
Putative metal chaperone {ECO:0000313|EMBL:KFC73934.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cobalamin synthesis protein P47K
SCN18_30_10_14_R3_P_scaffold_482_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18025..19326
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z103_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC73933.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_482_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19372..19776
DNA (405bp) protein (135aa)
Putative membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPN6_9RHIZ
GtrA-like protein {ECO:0000313|EMBL:KFC73932.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GtrA family protein
SCN18_30_10_14_R3_P_scaffold_482_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19777..20508)
DNA (732bp) protein (244aa)
Methyltransferase type 12 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0ULC5_METS4
Methyltransferase type 12 {ECO:0000313|EMBL:KFC73931.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
type 12 methyltransferase
SCN18_30_10_14_R3_P_scaffold_482_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20721..21977
DNA (1257bp) protein (419aa)
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:KFC73930.1}; EC=2.1.1.79 {ECO:0000313|EMBL:KFC73930.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A2C2_STAND
SCN18_30_10_14_R3_P_scaffold_482_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22252..22749
DNA (498bp) protein (166aa)
SCN18_30_10_14_R3_P_scaffold_482_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22769..23671)
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKY9_9RHIZ
Putative amino-acid metabolite efflux pump {ECO:0000313|EMBL:CEJ12799.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_482_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23797..24732
DNA (936bp) protein (312aa)
LysR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKY8_9RHIZ
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:CEJ12800.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulator
SCN18_30_10_14_R3_P_scaffold_482_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25014..25487
DNA (474bp) protein (158aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Elioraea tepidiphila RepID=UPI00036028E6
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:EJZ33531.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
3-demethylubiquinone-9 3-methyltransferase
SCN18_30_10_14_R3_P_scaffold_482_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25551..26354)
DNA (804bp) protein (268aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:KFC73924.1}; EC=1.3.1.12 {ECO:0000313|EMBL:KFC73924.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Prephenate dehydrogenase n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KN38_METC4
prephenate dehydrogenase
SCN18_30_10_14_R3_P_scaffold_482_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26530..26856)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R956_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:KFC73923.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_482_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26871..28079)
DNA (1209bp) protein (403aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPP3_9RHIZ
carbamoyl-phosphate synthase small subunit
SCN18_30_10_14_R3_P_scaffold_482_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28216..28677
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPP4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC73921.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GatB/YqeY
SCN18_30_10_14_R3_P_scaffold_482_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28848..30737
DNA (1890bp) protein (630aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DNA primase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPQ1_9RHIZ
dnaG; DNA primase
SCN18_30_10_14_R3_P_scaffold_482_30
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30940..32964
DNA (2025bp) protein (675aa)
RNA polymerase sigma factor RpoD n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E332BF
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
RNA polymerase sigma factor RpoD
Displaying items 1-30 of 50 in total

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